Fix assets for pyabc visserver. (#616)

* Fix assets for pyabc visserver.

* Update R.

* Fix for logo path in abc-server-dash

* Preparing release notes for next patch release.

* Updating about.rst.

* Updating changelog.

Author: stephanmg

.github/workflows/deploy.yml

@@ -3,13 +3,14 @@ name: Deploy
 on:
   release:
     types: [created]
+   
 
 jobs:
   deploy:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.8]
+        python-version: [3.9]
 
     steps:
     - name: Check out repository

.github/workflows/install_deps.sh

@@ -34,11 +34,8 @@ do
         brew install r
       else
         # Linux
-        sudo apt-key adv \
-          --keyserver keyserver.ubuntu.com \
-          --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9
-        sudo add-apt-repository \
-          'deb https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/'
+        wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc | sudo gpg --dearmor -o /usr/share/keyrings/r-project.gpg
+        echo "deb [signed-by=/usr/share/keyrings/r-project.gpg] https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/" | sudo tee -a /etc/apt/sources.list.d/r-project.list
         sudo apt-get update
         sudo apt-get install r-base
       fi

CHANGELOG.rst

@@ -7,6 +7,17 @@ Release Notes
 0.12 Series
 ...........
 
+0.12.13 (2023-11-08)
+--------------------
+
+Fixes (#615):
+
+* Fix for wrong assets path in abc-server-dash 
+
+General
+
+* Added new maintainers to RTD's about section
+
 
 0.12.12 (2023-08-18)
 --------------------

MANIFEST.in

@@ -3,3 +3,4 @@ recursive-include pyabc/visserver/static *
 recursive-include pyabc/visserver/templates *
 include pyabc/storage/alembic.ini
 recursive-include pyabc/storage/migrations *
+recursive-include pyabc/visserver/assets *

doc/about.rst

@@ -14,6 +14,7 @@ Authors
 
 The first main developer of the package was Emmanuel Klinger, with major contributions from Dennis Rickert and Nick Jagiella.
 Currently, the main developer and maintainer is Yannik Schaelte.
+Additional maintainers are Jonas Arruda and Stephan Grein.
 Emad Alamoudi is co-developer with various contributions.
 Elba Raimúndez-Álvarez contributed to the examples.
 Felipe Reck contributed to the "look-ahead" Redis-based sampler and example notebook.

pyabc/version.py

@@ -1 +1 @@
-__version__ = '0.12.12'
+__version__ = '0.12.13'

pyabc/visserver/server_dash.py

@@ -23,13 +23,12 @@
 matplotlib.use('Agg')
 
 static = str(pathlib.Path(__file__).parent.absolute()) + '/assets/'
-static_logo = Path(str(pathlib.Path(__file__).parent.absolute())).parent.parent
 DOWNLOAD_DIR = tempfile.mkdtemp() + '/'
 db_path = DOWNLOAD_DIR
 parameter = ""
 square_png = static + 'square_v2.png'
 square_base64 = base64.b64encode(open(square_png, 'rb').read()).decode('ascii')
-pyABC_png = str(static_logo) + '/doc/logo/logo.png'
+pyABC_png = str(static) + '/pyABC_logo.png'
 pyABC_base64 = base64.b64encode(open(pyABC_png, 'rb').read()).decode('ascii')
 para_list = []
 colors = {