Getting R pre-commit hooks working

Author: davidorme

.github/workflows/ci.yaml

@@ -19,4 +19,4 @@ jobs:
           with:
             r-version: 'release'
             use-public-rspm: true
-        - uses: pre-commit/[email protected]
+        - uses: pre-commit/[email protected]

.pre-commit-config.yaml

@@ -24,9 +24,12 @@ repos:
     hooks:
     - id: markdownlint
   - repo: https://github.com/lorenzwalthert/precommit
-    # These are R specific tools to format and lint the code and check for common errors 
-    rev: v0.4.3.9003
-    hooks: 
+    # These are R specific tools to format and lint the code and check for common errors
+    # Note that this currently points to a specific GitHub commit to avoid an issue with
+    # Rcpp: https://github.com/lorenzwalthert/precommit/issues/612 but should be updated
+    # when that issue gets resolved in a published version.
+    rev: dcd2a60
+    hooks:
     - id: style-files
       args: [--style_pkg=styler, --indent_by=4, --style_fun=tidyverse_style]
     - id: lintr

.vscode/extensions.json

@@ -11,4 +11,4 @@
 	],
 	// List of extensions recommended by VS Code that should not be recommended for users of this workspace.
 	"unwantedRecommendations": []
-}
+}

pyproject.toml

@@ -20,7 +20,7 @@ version = "0.1.0"
 
 [tool.poetry.dependencies]
 numpy = "~2.1" # Pinning numpy less than 2.2.0 until this resolves: https://github.com/numpy/numpy/issues/27957
-python = ">=3.10,<3.13" 
+python = ">=3.10,<3.13"
 xarray = "^2025.1.1"
 pre-commit = "^4.1.0"
 radian = "^0.6.13"