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use h5py==3.1. 3.2 has issues in python3.7
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requirements.txt

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anytree>=2.8
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cython>=0.29
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editdistance>=0.5
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h5py>=3.1
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h5py==3.1
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hdbscan>=0.8
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matplotlib>=3.3
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networkx>=2.5

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