Mobr_app Currently Implemented Parameters Review

[caroliver]

mobr_app functions and their currently implemented parameters

All parameters that are BOLD are currently implemented while those in ITALICS are not. Please let me know if you would like any of the parameters not currently implemented to be added.

make_mob_in

• community matrix data
• plot attribute data
• coord_names (0, 1, or 2 can be specified - data entered using text field if necessary)

plot_rarefaction

• mob_in
• env_var
• method (individual, sample, and spatial)
• dens_ratio
• pooled
• col
• lwd
• log
• leg_loc

plot_abu

• mob_in
• env_var
• type (can select between rank or species) 
• pooled
• col
• lwd
• log
• leg_loc

get_mob_stats

• mob_in
• group_var
• index (Currently works for: N, S, f_0, pct_rare, S_PIE)
• effort_samples
• effort_min
• extrapolate
• return_NA
• rare_thres
• n_perm
• boot_groups
• conf_level
• cl

get_delta_stats

• mob_in
• group_var
• ref_group
• tests
• type
• stats (set as a text entry field - user must format correctly or error)
• inds (set as a text entry field - user must format correctly or error) 
• log_scale
• min_plots
• density_stat
• n_perm
• overall_p

[caroliver]

@dmcglinn Above is the list of functions mobr_app uses and the associated parameters that are either currently implemented or can be implemented if need be. Thanks for looking this over.