Fix resource gallery submission workflow (#381)

* Move IssueInfo.data initialization from __post_init_post_parse__ to _get_input_()

* Author affiliations parsing, use the term 'institution'

* Use model_dump() instead of dict() as the latter is deprecated

* Use model_dump_json() instead of dict() as the latter deprecated and json needs the former

* 'institution' to 'affiliation ' changes in gallery_generator and resource_gallery

* 'institution' to 'affiliation ' changes in collect-user-submission

Author: erogluorhan

.github/workflows/collect-user-submission.py

@@ -28,16 +28,15 @@ class IssueInfo:
     gh_event_path: pydantic.FilePath
     submission: Submission = pydantic.Field(default=None)
 
-    def __post_init_post_parse__(self):
-        with open(self.gh_event_path) as f:
-            self.data = json.load(f)
-
     def create_submission(self):
         self._get_inputs()
         self._create_submission_input()
         return self
 
     def _get_inputs(self):
+        with open(self.gh_event_path) as f:
+            self.data = json.load(f)
+
         self.author = self.data['issue']['user']['login']
         self.title = self.data['issue']['title']
         self.body = self.data['issue']['body']
@@ -78,6 +77,6 @@ def _create_submission_input(self):
 
 if __name__ == '__main__':
     issue = IssueInfo(gh_event_path=os.environ['GITHUB_EVENT_PATH']).create_submission()
-    inputs = issue.submission.dict()
+    inputs = issue.submission.model_dump_json()
     with open('resource-gallery-submission-input.json', 'w') as f:
         json.dump(inputs, f)

portal/_extensions/gallery_generator.py

@@ -78,7 +78,7 @@ def build_from_items(items, filename, title='Gallery', subtitle=None, subtext=No
         tag_class_str = ' '.join(tag_list_f)
 
         author_strs = set()
-        institution_strs = set()
+        affiliation_strs = set()
         for a in item['authors']:
             author_name = a.get('name', 'Anonymous')
             author_email = a.get('email', None)
@@ -88,20 +88,20 @@ def build_from_items(items, filename, title='Gallery', subtitle=None, subtext=No
                 _str = author_name
             author_strs.add(_str)
 
-            institution_name = a.get('institution', None)
-            if institution_name:
-                institution_url = a.get('institution_url', None)
-                if institution_url:
-                    _str = f'<a href="{institution_url}">{institution_name}</a>'
+            affiliation_name = a.get('affiliation', None)
+            if affiliation_name:
+                affiliation_url = a.get('affiliation_url', None)
+                if affiliation_url:
+                    _str = f'<a href="{affiliation_url}">{affiliation_name}</a>'
                 else:
-                    _str = institution_name
-                institution_strs.add(_str)
+                    _str = affiliation_name
+                affiliation_strs.add(_str)
 
         authors_str = f"<strong>Author:</strong> {', '.join(author_strs)}"
-        if institution_strs:
-            institutions_str = f"<strong>Institution:</strong> {' '.join(institution_strs)}"
+        if affiliation_strs:
+            affiliations_str = f"<strong>Affiliation:</strong> {' '.join(affiliation_strs)}"
         else:
-            institutions_str = ''
+            affiliations_str = ''
 
         ellipsis_str = '<a class="modal-btn"> ... more</a>'
         short_description = truncate(item['description'], max_descr_len, ellipsis=ellipsis_str)
@@ -114,7 +114,7 @@ def build_from_items(items, filename, title='Gallery', subtitle=None, subtext=No
 <h3 class="display-3">{item["title"]}</h3>
 {authors_str}
 <br/>
-{institutions_str}
+{affiliations_str}
 <p class="my-2">{item['description']}</p>
 <p class="my-2">{tags}</p>
 <p class="mt-3 mb-0"><a href="{item["url"]}" class="btn btn-outline-primary btn-block">Visit Website</a></p>
@@ -133,7 +133,7 @@ def build_from_items(items, filename, title='Gallery', subtitle=None, subtext=No
 <img src="{thumbnail}" class="gallery-thumbnail" />
 <div class="container">
 <a href="{item["url"]}" class="text-decoration-none"><h4 class="display-4 p-0">{item["title"]}</h4></a>
-<p class="card-subtitle">{authors_str}<br/>{institutions_str}</p>
+<p class="card-subtitle">{authors_str}<br/>{affiliations_str}</p>
 <p class="my-2">{short_description}</p>
 </div>
 </div>