From b296b9a66a8b5703bc374a4928d6d5d51d0293cb Mon Sep 17 00:00:00 2001 From: Alessio Buccino Date: Fri, 7 Nov 2025 11:14:50 +0100 Subject: [PATCH 1/2] Add Allen ND ephys hybrid evaluation --- .../allen-nd-ephys-hybrid-evaluation.yaml | 32 +++++++++++++++++++ 1 file changed, 32 insertions(+) create mode 100644 datasets/allen-nd-ephys-hybrid-evaluation.yaml diff --git a/datasets/allen-nd-ephys-hybrid-evaluation.yaml b/datasets/allen-nd-ephys-hybrid-evaluation.yaml new file mode 100644 index 000000000..064ccf403 --- /dev/null +++ b/datasets/allen-nd-ephys-hybrid-evaluation.yaml @@ -0,0 +1,32 @@ +Name: Allen Institute for Neural Dynamics - Extracellular Electrophysiology Compression Benchmark +Description: Evaluation of spike sorting methods is a challenging task, as it requires both ground-truth data and a variety of sorting algorithms to compare against. This dataset contains a set of hybrid data specifically designed for benchmarking spike sorting methods. +Documentation: https://allenneuraldynamics.github.io/data.html#aind-benchmark-dataephys-evaluation +Contact: aindopendata@alleninstitute.org +ManagedBy: "[Allen Institute](http://neuraldynamics.alleninstitute.org/)" +UpdateFrequency: Weekly +Tags: + - aws-pds + - neurobiology + - life sciences + - signal processing + - electrophysiology + - Mus musculus +License: CC-BY-4.0 +Resources: + - Description: Project data files in a public bucket + ARN: arn:aws:s3:::aind-benchmark-data/ephys-hybrid-evaluation + Region: us-west-2 + Type: S3 Bucket +DataAtWork: + Tutorials: + - Title: AIND ephys hybrid evaluation benchmark data + URL: https://allenneuraldynamics.github.io/data.html#aind-benchmark-dataephys-hybrid-evaluation + AuthorName: David Feng, Alessio Buccino + AuthorURL: https://twitter.com/AllenInstitute + Tools & Applications: + Publications: + - Title: Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data + URL: TODO + AuthorName: Alessio P. Buccino, Arjun Sridhar, David Feng, Karel Svoboda, Joshua H. Siegle. + AuthorURL: http://neuraldynamics.alleninstitute.org/ + From f05cbbf4249f1987fda4b9a170ed362882ba4012 Mon Sep 17 00:00:00 2001 From: Alessio Buccino Date: Fri, 7 Nov 2025 11:17:49 +0100 Subject: [PATCH 2/2] Fix title and link --- datasets/allen-nd-ephys-hybrid-evaluation.yaml | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/datasets/allen-nd-ephys-hybrid-evaluation.yaml b/datasets/allen-nd-ephys-hybrid-evaluation.yaml index 064ccf403..b985e4712 100644 --- a/datasets/allen-nd-ephys-hybrid-evaluation.yaml +++ b/datasets/allen-nd-ephys-hybrid-evaluation.yaml @@ -1,6 +1,6 @@ -Name: Allen Institute for Neural Dynamics - Extracellular Electrophysiology Compression Benchmark +Name: Allen Institute for Neural Dynamics - Extracellular Electrophysiology Hybrid Evaluation Benchmark Description: Evaluation of spike sorting methods is a challenging task, as it requires both ground-truth data and a variety of sorting algorithms to compare against. This dataset contains a set of hybrid data specifically designed for benchmarking spike sorting methods. -Documentation: https://allenneuraldynamics.github.io/data.html#aind-benchmark-dataephys-evaluation +Documentation: https://allenneuraldynamics.github.io/data.html#aind-benchmark-dataephys-hybrid-evaluation Contact: aindopendata@alleninstitute.org ManagedBy: "[Allen Institute](http://neuraldynamics.alleninstitute.org/)" UpdateFrequency: Weekly @@ -29,4 +29,3 @@ DataAtWork: URL: TODO AuthorName: Alessio P. Buccino, Arjun Sridhar, David Feng, Karel Svoboda, Joshua H. Siegle. AuthorURL: http://neuraldynamics.alleninstitute.org/ -