Remove SpatialReference from example atlas descriptions

effigies · effigies · commit e5e0dc947e1c · 2025-11-06T09:52:48.000-05:00
diff --git a/atlas-4S/atlas-4S_description.json b/atlas-4S/atlas-4S_description.json
@@ -138,6 +138,5 @@
             ]
         }
     },
-    "SpatialReference": "",
     "Species": "Human"
 }
diff --git a/atlas-AAL/atlas-AAL_description.json b/atlas-AAL/atlas-AAL_description.json
@@ -34,5 +34,4 @@
     "Species": "Human",
     "DerivedFrom": "MNI single-subject T1-weighted high-resolution volume (Collins brain)",
     "SampleSize": 1,
-    "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNIColin27_res-1_T1w.nii.gz"
 }
diff --git a/atlas-Destrieux/atlas-Destrieux_description.json b/atlas-Destrieux/atlas-Destrieux_description.json
@@ -30,5 +30,4 @@
     "Species": "Human",
     "DerivedFrom": "Training set of 12 healthy subjects (24 hemispheres) with high-resolution T1-weighted MPRAGE scans (1.5T Siemens Sonata)",
     "SampleSize": 12,
-    "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-fsaverage_res-1_T1w.nii.gz"
 }
diff --git a/atlas-DiFuMo/atlas-DiFuMo_description.json b/atlas-DiFuMo/atlas-DiFuMo_description.json
@@ -27,5 +27,4 @@
     "Species": "Human",
     "DerivedFrom": "27 fMRI studies from OpenNeuro (2.4TB total, millions of functional brain volumes)",
     "SampleSize": 27,
-    "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNI152NLin6Asym_res-2_T1w.nii.gz"
 }
diff --git a/atlas-HOSPA/atlas-HOSPA_description.json b/atlas-HOSPA/atlas-HOSPA_description.json
@@ -1,7 +1,6 @@
 {
     "Name": "Harvard-Oxford Subcortical Probabilistic Atlas",
     "SampleSize": 200,
-    "SpatialReference": "",
     "Description": "The Harvard-Oxford Atlas 2.0 project is developing a state-of-the-art, high-resolution full brain MR atlas consisting of 200 high definition MR data sets from the Human Connectome Project (HCP) parcellated into 392 gray and white matter PUs using structural MRI and 189 white matter fascicles using diffusion MRI. Manual parcellation will be performed based on a developed neuroanatomical ontology using a principled and well-defined parcellation methodology.",
     "Authors": [
         "R. Jarrett Rushmore",
diff --git a/atlas-HarvardOxford/atlas-HarvardOxford_description.json b/atlas-HarvardOxford/atlas-HarvardOxford_description.json
@@ -21,6 +21,5 @@
     ],
     "Species": "Human",
     "DerivedFrom": "T1-weighted structural MRI scans from 37 subjects (21 male, 16 female, ages 18-50) manually segmented by Harvard Center for Morphometric Analysis",
-    "SpatialReference": "https://templateflow.org/browse/",
     "SampleSize": 37
 }
diff --git a/atlas-Juelich/atlas-Juelich_description.json b/atlas-Juelich/atlas-Juelich_description.json
@@ -33,5 +33,4 @@
     "Species": "Human",
     "SampleSize": 10,
     "DerivedFrom": "Histological examination of 10 post-mortem human brains (5 male, 5 female) with cyto- and myelo-architectonic segmentations",
-    "SpatialReference": "https://templateflow.org/browse"
 }
diff --git a/atlas-Schaefer/atlas-Schaefer2018_description.json b/atlas-Schaefer/atlas-Schaefer2018_description.json
@@ -40,5 +40,4 @@
     "Species": "Human",
     "DerivedFrom": "Genomics Superstruct Project (GSP) resting-state fMRI data (N=1489 young adults, ages 18-35). Validated using Human Connectome Project (HCP, N=820) and Nathan Kline Institute Rockland Sample (NKI, N=205, ages 6-85)",
     "SampleSize": 1489,
-    "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNI152NLin6Asym_res-2_T1w.nii.gz"
 }
diff --git a/atlas-Talairach/atlas-Talairach_description.json b/atlas-Talairach/atlas-Talairach_description.json
@@ -39,5 +39,4 @@
     ],
     "Species": "Human",
     "SampleSize": 1,
-    "SpatialReference": "https://templateflow.org/browse/"
 }

Original file line number	Diff line number	Diff line change
`@@ -138,6 +138,5 @@`
`138`	`138`	`]`
`139`	`139`	`}`
`140`	`140`	`},`
`141`		`- "SpatialReference": "",`
`142`	`141`	`"Species": "Human"`
`143`	`142`	`}`
Original file line number	Diff line number	Diff line change
`@@ -34,5 +34,4 @@`
`34`	`34`	`"Species": "Human",`
`35`	`35`	`"DerivedFrom": "MNI single-subject T1-weighted high-resolution volume (Collins brain)",`
`36`	`36`	`"SampleSize": 1,`
`37`		`- "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNIColin27_res-1_T1w.nii.gz"`
`38`	`37`	`}`
Original file line number	Diff line number	Diff line change
`@@ -30,5 +30,4 @@`
`30`	`30`	`"Species": "Human",`
`31`	`31`	`"DerivedFrom": "Training set of 12 healthy subjects (24 hemispheres) with high-resolution T1-weighted MPRAGE scans (1.5T Siemens Sonata)",`
`32`	`32`	`"SampleSize": 12,`
`33`		`- "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-fsaverage_res-1_T1w.nii.gz"`
`34`	`33`	`}`
Original file line number	Diff line number	Diff line change
`@@ -27,5 +27,4 @@`
`27`	`27`	`"Species": "Human",`
`28`	`28`	`"DerivedFrom": "27 fMRI studies from OpenNeuro (2.4TB total, millions of functional brain volumes)",`
`29`	`29`	`"SampleSize": 27,`
`30`		`- "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNI152NLin6Asym_res-2_T1w.nii.gz"`
`31`	`30`	`}`
Original file line number	Diff line number	Diff line change
`@@ -1,7 +1,6 @@`
`1`	`1`	`{`
`2`	`2`	`"Name": "Harvard-Oxford Subcortical Probabilistic Atlas",`
`3`	`3`	`"SampleSize": 200,`
`4`		`- "SpatialReference": "",`
`5`	`4`	`"Description": "The Harvard-Oxford Atlas 2.0 project is developing a state-of-the-art, high-resolution full brain MR atlas consisting of 200 high definition MR data sets from the Human Connectome Project (HCP) parcellated into 392 gray and white matter PUs using structural MRI and 189 white matter fascicles using diffusion MRI. Manual parcellation will be performed based on a developed neuroanatomical ontology using a principled and well-defined parcellation methodology.",`
`6`	`5`	`"Authors": [`
`7`	`6`	`"R. Jarrett Rushmore",`
Original file line number	Diff line number	Diff line change
`@@ -21,6 +21,5 @@`
`21`	`21`	`],`
`22`	`22`	`"Species": "Human",`
`23`	`23`	`"DerivedFrom": "T1-weighted structural MRI scans from 37 subjects (21 male, 16 female, ages 18-50) manually segmented by Harvard Center for Morphometric Analysis",`
`24`		`- "SpatialReference": "https://templateflow.org/browse/",`
`25`	`24`	`"SampleSize": 37`
`26`	`25`	`}`
Original file line number	Diff line number	Diff line change
`@@ -33,5 +33,4 @@`
`33`	`33`	`"Species": "Human",`
`34`	`34`	`"SampleSize": 10,`
`35`	`35`	`"DerivedFrom": "Histological examination of 10 post-mortem human brains (5 male, 5 female) with cyto- and myelo-architectonic segmentations",`
`36`		`- "SpatialReference": "https://templateflow.org/browse"`
`37`	`36`	`}`
Original file line number	Diff line number	Diff line change
`@@ -40,5 +40,4 @@`
`40`	`40`	`"Species": "Human",`
`41`	`41`	`"DerivedFrom": "Genomics Superstruct Project (GSP) resting-state fMRI data (N=1489 young adults, ages 18-35). Validated using Human Connectome Project (HCP, N=820) and Nathan Kline Institute Rockland Sample (NKI, N=205, ages 6-85)",`
`42`	`42`	`"SampleSize": 1489,`
`43`		`- "SpatialReference": "https://templateflow.s3.amazonaws.com/tpl-MNI152NLin6Asym_res-2_T1w.nii.gz"`
`44`	`43`	`}`
Original file line number	Diff line number	Diff line change
`@@ -39,5 +39,4 @@`
`39`	`39`	`],`
`40`	`40`	`"Species": "Human",`
`41`	`41`	`"SampleSize": 1,`
`42`		`- "SpatialReference": "https://templateflow.org/browse/"`
`43`	`42`	`}`