pixel count mismatch

[sunshx-bioinfo]

Hi,

In my RCTD(spacexr Version: 2.0.7) results, the remained pixel number doesn't match the expected value. As you see, the number of piexs with nUMI >= 1 is 94839.

Then I run RCTD with cmd:

myRCTD <- create.RCTD(puck, reference, max_cores = 10,UMI_min = 1,CELL_MIN_INSTANCE=20)
RCTD <- run.RCTD(myRCTD, doublet_mode = 'doublet')

And in my results, the remained pixel number is 83906, but it should be 94839, right?

is there any other parameter for filtering pixels besides UMI_min and UMI_max ?

Best,
xing