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The command exomiser annotate was just added in v15.0.0 (though it's not present from the help menu). The output TSV generated by exomiser annotate has no header.
Fix
The .withSkipHeaderRecord() call here should be removed.
Summary
The command
exomiser annotatewas just added in v15.0.0 (though it's not present from the help menu). The output TSV generated byexomiser annotatehas no header.Fix
The
.withSkipHeaderRecord()call here should be removed.