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Accommodate name change of msigdbdf to msigdbrdata #169

Accommodate name change of msigdbdf to msigdbrdata

Accommodate name change of msigdbdf to msigdbrdata #169

Triggered via push March 12, 2026 19:01
Status Failure
Total duration 24m 0s
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R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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3 errors and 8 warnings
ubuntu-latest ( - bioconductor/bioconductor_docker:RELEASE_3_20)
Input required and not supplied: path
ubuntu-latest ( - bioconductor/bioconductor_docker:RELEASE_3_20)
Process completed with exit code 1.
ubuntu-latest ( - bioconductor/bioconductor_docker:RELEASE_3_20)
Process completed with exit code 1.
ubuntu-latest ( - bioconductor/bioconductor_docker:RELEASE_3_20)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows-latest (release - )
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v3, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2, r-lib/actions/setup-tinytex@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows-latest (release - )
dependencies 'dplyr', 'readr', 'rlang', 'stringr', 'tibble', 'tidyr', 'tidyselect' are not available
macOS-latest (release - )
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v3, r-lib/actions/setup-pandoc@v2, r-lib/actions/setup-r@v2, r-lib/actions/setup-tinytex@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macOS-latest (release - )
gcc 15.2.0_1 is already installed and up-to-date. To reinstall 15.2.0_1, run: brew reinstall gcc
macOS-latest (release - )
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (release - )
harfbuzz 12.3.2 is already installed and up-to-date. To reinstall 12.3.2, run: brew reinstall harfbuzz
macOS-latest (release - )
dependencies ‘dplyr’, ‘readr’, ‘rlang’, ‘stringr’, ‘tibble’, ‘tidyr’, ‘tidyselect’ are not available