Initial commit, including benchmarks used for Tapir journal paper submission.

Author: neboat

.gitignore

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+*~
+*Run-*.txt
+*Cilksan*.txt
+*Cilkscale*.txt
+*.o
+
+# Compiled benchmarks
+cilk5/cholesky
+cilk5/cilksort
+cilk5/fib
+cilk5/heat
+cilk5/lu
+cilk5/matmul
+cilk5/qsort
+cilk5/rectmul
+cilk5/strassen
+
+intel/*/release
+intel/Mandelbrot*/*.bmp
+
+pbbs/breadthFirstSearch/*/BFS
+pbbs/comparisonSort/*/sort
+pbbs/convexHull/*/hull
+pbbs/delaunayTriangulation/*/delaunay
+pbbs/delaunayRefine/*/refine
+pbbs/dictionary/*/dict
+pbbs/integerSort/*/isort
+pbbs/maximalIndependentSet/*/MIS
+pbbs/maximalMatching/*/matching
+pbbs/minSpanningForest/*/MST
+pbbs/nBody/*/nbody
+pbbs/nearestNeighbors/*/neighbors
+pbbs/rayCast/*/ray
+pbbs/removeDuplicates/*/remDups
+pbbs/spanningForest/*/ST
+pbbs/suffixArray/*/SA
+pbbs/testData/geometryData/data
+pbbs/testData/geometryData/addRays
+pbbs/testData/geometryData/plummer
+pbbs/testData/geometryData/uniform
+pbbs/testData/graphData/data
+pbbs/testData/graphData/addWeights
+pbbs/testData/graphData/gridGraph
+pbbs/testData/graphData/maxFlowGens
+pbbs/testData/graphData/randLocalGraph
+pbbs/testData/graphData/rMatGraph
+pbbs/testData/sequenceData/data
+pbbs/testData/sequenceData/addDataSeq
+pbbs/testData/sequenceData/exptSeq
+pbbs/testData/sequenceData/randomSeq
+pbbs/testData/sequenceData/trigramSeq
+pbbs/testData/sequenceData/trigramString
+!pbbs/testData/*/data/Makefile
+
+

cilk5/Makefile

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+ALL_TESTS = fft cholesky nqueens qsort rectmul strassen
+
+CC ?= gcc
+CXX ?= g++
+
+CFLAGS = -Wall -O3 # -DPIR # -fcilkplus
+CXXFLAGS = -Wall -O3 # -DPIR # -fcilkplus
+LDFLAGS =
+
+ifeq ($(SERIAL),1)
+	SERIAL_FLAGS=-Dcilk_for=for -Dcilk_spawn= -Dcilk_sync= 
+	CFLAGS += $(SERIAL_FLAGS)
+	CXXFLAGS += $(SERIAL_FLAGS)
+endif
+
+CFLAGS += $(EXTRA_CFLAGS)
+CXXFLAGS += $(EXTRA_CXXFLAGS)
+LDFLAGS += $(EXTRA_LDFLAGS)
+LDLIBS += $(EXTRA_LDLIBS)
+
+.PHONY : default clean
+
+default: all
+
+all: $(ALL_TESTS)
+
+%.o : %.c
+	$(CC) $(CFLAGS) -c $<
+
+%.o : %.cpp
+	$(CXX) $(CXXFLAGS) -c $<
+
+%.o : %.cc
+	$(CXX) $(CXXFLAGS) -c $<
+
+cholesky: getoptions.o cholesky.o
+cilksort: getoptions.o cilksort.o
+fft: getoptions.o fft.o
+heat: getoptions.o heat.o
+knapsack: getoptions.o knapsack.o
+lu: getoptions.o lu.o
+matmul: getoptions.o matmul.o
+nqueens: getoptions.o nqueens.o
+rectmul: getoptions.o rectmul.o
+strassen: getoptions.o strassen.o
+loop-matmul: loop-matmul.o
+qsort: qsort.o
+
+fft cholesky : LDLIBS += -lm
+
+% : %.o
+	$(CXX) $(LDFLAGS) $^ $(LDLIBS) -o $@
+
+clean :
+	rm -f $(ALL_TESTS) *.o *.d* *~