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tabix.csh
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#!/bin/csh
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr4_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr4_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr4_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr5_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr5_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr5_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr6_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr6_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr6_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr7_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr7_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr7_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr8_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr8_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr8_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr9_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr9_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr9_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr10_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr10_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr10_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr11_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr11_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr11_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr12_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr12_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr12_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr13_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr13_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr13_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr14_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr14_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr14_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr15_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr15_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr15_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr16_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr16_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr16_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr17_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr17_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr17_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr18_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr18_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr18_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr19_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr19_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr19_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr20_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr20_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr20_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr21_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr21_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr21_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chr22_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chr22_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chr22_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chrX_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chrX_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chrX_tabix_new.txt
python compare_allele_to_existing_tabix.py /gpfs/home/gerikson/wellderly/alleleFreq/PrefilterVCF/Wellderly325_WhiteNoREl_unfiltered_chrY_alleleFreq.txt /gpfs/group/schork/bshipman/all_allele_freq/CHROMS/chrY_hapmap-1kgenomes-69CGI-Wellderly_AF.txt chrY_tabix_new.txt