Description
Bug report
There's a chance I'm doing something boneheaded here, but I am trying to pull the latest seqera-labs AWS batch docker images from public.ecr.aws/seqera-labs/nextflow:latest from an AWS c6g linux/arm64/8 image, and getting linux/amd64 images.
Expected behavior and actual behavior
The seqera-labs gallery suggests that arm images are available. From an arm64 machine, I am invoking this build with the Dockerfile below
docker build --platform linux/arm64 .
I would expect that to select the arm images (I couldn't see anything from the gallery that indicated architecture) but I'm assuming the docker build grabs the right one.
ARG VERSION=latest
FROM public.ecr.aws/seqera-labs/nextflow:${VERSION} AS build
RUN yum update -y \
&& yum install -y \
unzip \
&& yum clean -y all
RUN rm -rf /var/cache/yum
# install awscli v2
RUN curl -s "https://awscli.amazonaws.com/awscli-exe-linux-aarch64.zip" -o "/tmp/awscliv2.zip" \
&& unzip -q /tmp/awscliv2.zip -d /tmp \
&& /tmp/aws/install -b /usr/bin \
&& rm -rf /tmp/aws*
# install a custom entrypoint script that handles being run within an AWS Batch Job
COPY nextflow.aws.sh /opt/bin/nextflow.aws.sh
RUN chmod +x /opt/bin/nextflow.aws.sh
WORKDIR /opt/work
ENTRYPOINT ["/opt/bin/nextflow.aws.sh"]
When I don't explicitly add the target, I get an architecture error - it clearly pulled the wrong version.
$ docker build .
Sending build context to Docker daemon 7.168kB
Step 1/9 : ARG VERSION=latest
Step 2/9 : FROM public.ecr.aws/seqera-labs/nextflow:${VERSION} AS build
latest: Pulling from seqera-labs/nextflow
8be3d01330d7: Pull complete
05200b11ae6e: Pull complete
4d4e2f332acf: Pull complete
f29f4675beae: Pull complete
1f0835b691b9: Pull complete
85af6e7a5c27: Pull complete
4f8bff6a50cd: Pull complete
Digest: sha256:01bdca61259a1a431c9d8534c0bb8353d413cce8f9638bb8d4e7b854cb5ce43c
Status: Downloaded newer image for public.ecr.aws/seqera-labs/nextflow:latest
---> a1c176ab3423
Step 3/9 : RUN yum update -y && yum install -y unzip && yum clean -y all
---> [Warning] The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
---> Running in d0d491444ad2
exec /bin/sh: exec format error
The command '/bin/sh -c yum update -y && yum install -y unzip && yum clean -y all' returned a non-zero code: 1
When I force the architecture explicitly, docker warns me
WARNING: Pulled image with specified platform (linux/arm64), but the resulting image's configured platform (linux/amd64) does not match.
This is most likely caused by a bug in the build system that created the fetched image (public.ecr.aws/seqera-labs/nextflow:23.04.3).
Please notify the image author to correct the configuration.
Steps to reproduce the problem
On an arm64 machine, using the Dockerfile above, try
docker build --platform linux/arm64 .
Program output
See above
Environment
- Linux aws c6g instance
- 6.1.34-59.116.amzn2023.aarch64 # 1 SMP Thu Jun 29 18:11:49 UTC 2023 aarch64 aarch64 aarch64 GNU/Linux
- Docker version 20.10.23, build 7155243
Additional context
Hoping it's something dumb I've done. I'd be happy to try to build the image from scratch - looking at the source right now to figure out how it was probably built.