Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Stoichiometric inconsistency #771

Open
akhila-george opened this issue Mar 27, 2025 · 1 comment
Open

Stoichiometric inconsistency #771

akhila-george opened this issue Mar 27, 2025 · 1 comment

Comments

@akhila-george
Copy link

Hi,
I analyzed a genome-scale metabolic model for a photosynthetic microbe using MEMOTE. The stoichiometric consistency was zero, and the unconserved metabolite identified was 'light'. Additionally, the Minimal inconsistent net stoichiometries also listed 'light'. There is an exchange reaction supplying light, as well as a reaction consuming light. Could you please assist me in resolving this issue?

@akhila-george
Copy link
Author

The model was found consistent when I used 'checkStoichiometricConsistency' from Cobra Toolbox.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant