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Merge pull request #37 from ropensci/new-logo
Create and upload high res logo
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.zenodo.json

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DESCRIPTION

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Package: git2rdata
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Title: Store and Retrieve Data.frames in a Git Repository
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Version: 0.0.5
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Version: 0.1
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Authors@R: c(
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person(
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"Thierry", "Onkelinx", role = c("aut", "cre"),
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"Floris", "Vanderhaeghe", role = "ctb",
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email = "[email protected]",
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comment = c(ORCID = "0000-0002-6378-6229")),
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person(
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"Peter", "Desmet", role = "ctb",
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email = "[email protected]",
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comment = c(ORCID = "0000-0002-8442-8025")),
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person(
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"Research Institute for Nature and Forest",
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role = c("cph", "fnd"), email = "[email protected]"))
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LazyData: true
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Roxygen: list(markdown = TRUE)
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RoxygenNote: 6.1.1
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URL: https://github.com/inbo/git2rdata, https://doi.org/10.5281/zenodo.1485309
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BugReports: https://github.com/inbo/git2rdata/issues
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URL: https://github.com/ropensci/git2rdata, https://doi.org/10.5281/zenodo.1485309
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BugReports: https://github.com/ropensci/git2rdata/issues
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Collate:
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'clean_data_path.R'
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'git2rdata-package.R'

NEWS.md

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git2rdata 0.1 (2019-06-04)
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============================
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* Transfer to rOpenSci.
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* Use new logo (@peterdesmet, #37).
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* Add estimate of upper bound of the number of commits.
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git2rdata 0.0.5 (2019-05-21)
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============================
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R/prune.R

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#' listed in a `.gitignore` file. Selecting `modified` will remove both
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#' `unmodified` and `modified` data files. Selecting `ìgnored` will remove
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#' `unmodified`, `modified` and `ignored` data files. `all` refers to all
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#' visible data files, inclusing `untracked` files.
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#' visible data files, including `untracked` files.
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#' @rdname rm_data
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rm_data.git_repository <- function(
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root, path = NULL, recursive = TRUE, ..., stage = FALSE,

README.md

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[![minimal R version](https://img.shields.io/badge/R%3E%3D-3.5.0-6666ff.svg)](https://cran.r-project.org/)
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[![DOI](https://zenodo.org/badge/147685405.svg)](https://zenodo.org/badge/latestdoi/147685405)
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[![Travis-CI Build Status](https://travis-ci.org/inbo/git2rdata.svg?branch=master)](https://travis-ci.org/inbo/git2rdata)
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[![AppVeyor Build status](https://ci.appveyor.com/api/projects/status/a3idhi9f6ls9xu8r/branch/master?svg=true)](https://ci.appveyor.com/project/ThierryO/git2rdata/branch/master)
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[![codecov](https://codecov.io/gh/inbo/git2rdata/branch/master/graph/badge.svg)](https://codecov.io/gh/inbo/git2rdata)
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[![Travis-CI Build Status](https://travis-ci.org/ropensci/git2rdata.svg?branch=master)](https://travis-ci.org/ropensci/git2rdata)
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[![AppVeyor Build status](https://ci.appveyor.com/api/projects/status/cfbjb835fqb3dc7m/branch/master?svg=true)](https://ci.appveyor.com/project/ThierryO/git2rdata-n60yg/branch/master)
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[![codecov](https://codecov.io/gh/ropensci/git2rdata/branch/master/graph/badge.svg)](https://codecov.io/gh/ropensci/git2rdata)
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![GitHub forks](https://img.shields.io/github/forks/inbo/git2rdata.svg?style=social)
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![GitHub stars](https://img.shields.io/github/stars/inbo/git2rdata.svg?style=social)
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![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/inbo/git2rdata.svg)
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![GitHub repo size](https://img.shields.io/github/repo-size/inbo/git2rdata.svg)
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![GitHub forks](https://img.shields.io/github/forks/ropensci/git2rdata.svg?style=social)
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![GitHub stars](https://img.shields.io/github/stars/ropensci/git2rdata.svg?style=social)
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![GitHub code size in bytes](https://img.shields.io/github/languages/code-size/ropensci/git2rdata.svg)
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![GitHub repo size](https://img.shields.io/github/repo-size/ropensci/git2rdata.svg)
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<p style="display:none">Please visit the git2rdata website at https://inbo.github.io/git2rdata/. The vignette code on the website link to a rendered version of the vignette. Functions have a link to their help file.</p>
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<p style="display:none">**Please visit the git2rdata website at https://ropensci.github.io/git2rdata/. The vignette code on the website link to a rendered version of the vignette. Functions have a link to their help file.**</p>
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## Rationale
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# install with vignettes (recommended)
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remotes::install_github(
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"inbo/git2rdata",
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"ropensci/git2rdata",
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build = TRUE,
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dependencies = TRUE,
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build_opts = c("--no-resave-data", "--no-manual")
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)
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# install without vignettes
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remotes::install_github("inbo/git2rdata"))
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remotes::install_github("ropensci/git2rdata"))
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```
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## Usage in a Nutshell
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## What data sizes can `git2rdata` handle?
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The recommendation for git repositories is to use files smaller than 100 MB, an overall repository size less than 1 GB and less than 25k files. The individual file size is the limiting factor. Storing the airbag dataset ([`DAAG::nassCDS`](https://cran.r-project.org/package=DAAG)) with `write_vc()` requires on average 68 (optimized) or 97 (verbose) byte per record. The 100 MB file limit for this data is reached after about 1.5 million (optimize) or 1 million (verbose) observations. Your mileage might vary.
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The recommendation for git repositories is to use files smaller than 100 MiB, an overall repository size less than 1 GiB and less than 25k files. The individual file size is the limiting factor. Storing the airbag dataset ([`DAAG::nassCDS`](https://cran.r-project.org/package=DAAG)) with `write_vc()` requires on average 68 (optimized) or 97 (verbose) byte per record. The 100 MiB file limit for this data is reached after about 1.5 million (optimize) or 1 million (verbose) observations.
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Storing a 90% random subset of the airbag dataset requires 370 kiB (optimized) or 400 kiB (verbose) storage in the git history. Updating the dataset with other 90% random subsets requires on average 60 kiB (optimized) to 100 kiB (verbose) per commit. The git history limit of 1 GiB will be reached after 17k (optimized) to 10k (verbose) commits.
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Your mileage might vary.
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## Citation
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- `testthat`: R scripts with unit tests using the [testthat](http://testthat.r-lib.org/) framework
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- `vignettes`: source code for the vignettes describing the package
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- `man-roxygen`: templates for documentation in Roxygen format
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- `pkgdown`: additional source files for the `git2rdata` [website](https://inbo.github.io/git2rdata/)
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- `pkgdown`: additional source files for the `git2rdata` [website](https://ropensci.github.io/git2rdata/)
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- `.github`: guidelines and templates for contributors
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- `sticker`: source code for the `git2rdata` hex sticker
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```
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git2rdata
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├── man-roxygen
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├── pkgdown
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├── R
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├── sticker
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├─┬ tests
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│ └── testthat
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└── vignettes

_pkgdown.yml

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href: CONTRIBUTING.html
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right:
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- icon: fa-github fa-lg
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href: https://github.com/inbo/git2rdata
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href: https://github.com/ropensci/git2rdata
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- icon: fa-twitter fa-lg
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href: https://twitter.com/INBOVlaanderen
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- icon: fa-facebook fg-lg
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href: "https://www.muscardinus.be"
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Research Institute for Nature and Forest:
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href: "https://www.inbo.be/en"
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html: "<img src='https://inbo.github.io/git2rdata/reference/figures/logo_en.png' height=24>"
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html: "<img src='https://ropensci.github.io/git2rdata/reference/figures/logo_en.png' height=24>"

codemeta.json

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"identifier": "git2rdata",
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"description": "Make versioning of data.frame easy and efficient using git repositories.",
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"name": "git2rdata: Store and Retrieve Data.frames in a Git Repository",
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"codeRepository": "https://github.com/inbo/git2rdata",
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"codeRepository": "https://github.com/ropensci/git2rdata",
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"relatedLink": "https://doi.org/10.5281/zenodo.1485309",
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"issueTracker": "https://github.com/inbo/git2rdata/issues",
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"issueTracker": "https://github.com/ropensci/git2rdata/issues",
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"license": "https://spdx.org/licenses/GPL-3.0",
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"version": "0.0.5",
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"version": "0.1",
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"programmingLanguage": {
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"@type": "ComputerLanguage",
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"name": "R",
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"familyName": "Vanderhaeghe",
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"email": "[email protected]",
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"@id": "https://orcid.org/0000-0002-6378-6229"
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},
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{
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"@type": "Person",
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"givenName": "Peter",
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"familyName": "Desmet",
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"email": "[email protected]",
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"@id": "https://orcid.org/0000-0002-8442-8025"
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}
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],
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"copyrightHolder": [
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"sameAs": "https://CRAN.R-project.org/package=yaml"
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}
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"releaseNotes": "https://github.com/inbo/git2rdata/blob/master/NEWS.md",
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"readme": "https://github.com/inbo/git2rdata/blob/master/README.md",
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"fileSize": "348.673KB",
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"releaseNotes": "https://github.com/ropensci/git2rdata/blob/master/NEWS.md",
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"readme": "https://github.com/ropensci/git2rdata/blob/master/README.md",
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"fileSize": "363.46KB",
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"contIntegration": [
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"https://travis-ci.org/inbo/git2rdata",
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man/figures/logo.png

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