Merge pull request #57 from sys-bio/update-libsbml

Update libsbml and libsbml's build.

Author: luciansmith

.github/workflows/main.yml

@@ -1,4 +1,6 @@
 name: BuildLibRoadRunnerDependencies
+env:
+  FORCE_JAVASCRIPT_ACTIONS_TO_NODE24: 'true' #for seanmiddleditch/gha-setup-ninja and ilammy/msvc-dev-cmd.
 
 on:
   push:
@@ -64,13 +66,13 @@ jobs:
 
     steps:
       - name: Checkout LibRoadRunner Dependencies
-        uses: actions/checkout@v4
+        uses: actions/checkout@main
         with:
           submodules: recursive
 
       - name: Set MSVC as the default compiler on Windows
         if: matrix.platform.os_type == 'windows'
-        uses: ilammy/msvc-dev-cmd@v1.13.0
+        uses: ilammy/msvc-dev-cmd@v1
 
       - name: Upgrade gcc on Linux
         if: matrix.platform.os_type == 'manylinux'
@@ -91,6 +93,7 @@ jobs:
           fi
 
       - name: Setup Ninja
+        if: matrix.platform.os_type == 'manylinux'
         uses: seanmiddleditch/gha-setup-ninja@master
 
       - name: Get Host Architecture
@@ -143,7 +146,7 @@ jobs:
 
       - name: Cache ccache files on non-Windows
         if: matrix.platform.os_type != 'windows'
-        uses: actions/cache@v4
+        uses: actions/cache@main
         with:
           path: ${RUNNER_WORKSPACE}/.ccache
           key:
@@ -198,7 +201,7 @@ jobs:
           echo "artifacts_path=${RUNNER_WORKSPACE}/install-libroadrunner-deps" >> "${GITHUB_ENV}"
 
       - name: Upload LibRoadRunner Dependencies binaries
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@main
         with:
           name: ${{env.artifacts_name}}
           path: ${{env.artifacts_path}}

third_party/CMakeLists.txt

@@ -71,6 +71,8 @@ set(EXPAT_LIBRARY "$<TARGET_LINKER_FILE:expat>" CACHE FILEPATH "Expat library" F
 message(STATUS "Adding libsbml as subdirectory")
 set(WITH_EXPAT ON CACHE BOOL "Compile libsbml with the expat library" FORCE)
 set(WITH_LIBXML OFF CACHE BOOL "Compile libsbml with libxml (off by default)" FORCE)
+SET(BZIP_INITIAL_VALUE OFF CACHE BOOL "Compile libsbml without bzip" FORCE)
+SET(WITH_ZLIB OFF CACHE BOOL "Compile libsbml without zlib" FORCE)
 add_subdirectory(libsbml)
 
 # needed because of the weird way libsbml handles the "lib" prefix