Merge pull request #276 from rahul7rajdn/apptainer_update

added Libraries to Apptainer; other minor updates

Author: hyesoon

.gitignore

@@ -2,3 +2,4 @@
 /.vscode
 *.cache
 *.code-workspace
+miscs/apptainer/vortex.sif

miscs/apptainer/README.md

@@ -1,8 +1,8 @@
 # Apptainer Build Process
 
-Use the Slurm scheduler to request an interactive job on Flubber9
+Use the Slurm scheduler to request an interactive job on Flubber1
 ```
-salloc -p rg-fpga --nodes=1 --ntasks-per-node=64 --mem=16G --nodelist flubber9 --time=01:00:00
+salloc -p rg-fpga --nodes=1 --ntasks-per-node=16 --mem=16G --nodelist flubber1 --time=08:00:00
 ```
 
 Go to `apptainer` directory
@@ -96,7 +96,7 @@ Apptainer> verilator --version
 Verilator 5.026 2024-06-15 rev v5.026-43-g065f36ab5
 
 Apptainer> cd hw/syn/xilinx/xrt
-Apptainer> PREFIX=test1 PLATFORM=xilinx_u50_gen3x16_xdma_5_202210_1 TARGET=hw NUM_CORES=1 make > build_u50_hw_1c.log 2>&1 &
+Apptainer> PREFIX=test1 PLATFORM=xilinx_u50_gen3x16_xdma_5_202210_1 TARGET=hw NUM_CORES=1 make JOBS=<number of cores allocated>  > build_u50_hw_1c.log 2>&1 &
 Creates ../test1_xilinx_u50_gen3x16_xdma_5_202210_1_hw/bin/vortex_afu.xclbin
 ```
 
@@ -108,8 +108,8 @@ Apptainer> pwd
 
 Apptainer> make -C runtime/ clean
 
-Apptainer> FPGA_BIN_DIR=hw/syn/xilinx/xrt/test1_xilinx_u50_gen3x16_xdma_5_202210_1_hw/bin  TARGET=hw PLATFORM=xilinx_u50_gen3x16_xdma_5_202210_1  ./ci/blackbox.sh --driver=xrt --app=demo
+Apptainer> FPGA_BIN_DIR=/home/vortex/build/hw/syn/xilinx/xrt/test1_xilinx_u50_gen3x16_xdma_5_202210_1_hw/bin  TARGET=hw PLATFORM=xilinx_u50_gen3x16_xdma_5_202210_1  ./ci/blackbox.sh --driver=xrt --app=demo
 
 Verify following line being printed:
 info: device name=xilinx_u50_gen3x16_xdma_base_5, memory_capacity=0x200000000 bytes, memory_banks=32.
-```
+```

miscs/apptainer/vortex.def

@@ -44,7 +44,8 @@ From: ubuntu:22.04
                        openjdk-11-jre-headless libcairo2 librsvg2-2 librsvg2-common \
                        openjdk-11-jre-zero libtheora0 libavcodec58 libcairo-gobject2 \
                        ca-certificates-java libchromaprint1 software-properties-common perl-modules bzip2 \
-                       unzip zlib1g-dev libtinfo5 g++ usbutils gawk bison gcc make tar python3.9 locales zstd uuid-dev ccache || true
+                       unzip zlib1g-dev libtinfo5 g++ usbutils pciutils gawk bison gcc make tar python3.9 locales zstd uuid-dev ccache \
+                       libboost-filesystem1.74.0 libboost-program-options1.74.0 libboost-system1.74.0 libboost-chrono1.74.0 libboost-thread1.74.0 environment-modules || true
 
     ln -s /usr/bin/python3 /usr/bin/python
 
@@ -97,4 +98,4 @@ From: ubuntu:22.04
     locale
     lsusb || echo "lsusb not available"
     ls -l /dev/null
-    echo "Container test successful!"
+    echo "Container test successful!"