@@ -31,10 +31,10 @@ message from the CLI. Here we will just mention some important things that could
3131
3232**Basis enthalpy: ** The quantity that is minimized is the basis enthalpy. This is :math: `H = E + pV`
3333with :math: `E` being the energy of the system, :math: `V` the volume of the basis and :math: `p` a "pressure" that
34- is defined in the fdf file with the `BasisPressure ` table. This "pressure" penalizes bigger
34+ is defined in the fdf file with the `` ` BasisPressure` ` table. This "pressure" penalizes bigger
3535basis, which result in more expensive calculations. It is the responsibility of the user to
36- set this value. As a rule of thumb, we recommend to set it to `0.02 GPa ` for the first two
37- rows of the periodic table and `0.2 GPa ` for the rest.
36+ set this value. As a rule of thumb, we recommend to set it to `` 0.02 GPa ` ` for the first two
37+ rows of the periodic table and `` 0.2 GPa ` ` for the rest.
3838
3939**The SIESTA command: ** There is a ``--siesta-cmd `` option to specify the way of executing SIESTA. By default, it
4040is simply calling the ``siesta `` command, but you could set it for example to ``mpirun -n 4 siesta ``
@@ -69,7 +69,7 @@ not installed by default. You can install it using pip:
6969 and the same would apply for other optimizers that you may want to use.
7070
7171**Output: ** The output that appears on the terminal is left to the particular optimizer.
72- However, sisl generates `.dat ` files which contain information about each SIESTA execution.
72+ However, sisl generates `` .dat ` ` files which contain information about each SIESTA execution.
7373These files contain one column for each variable being optimized and one column for the
7474metric to minimize.
7575
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