Added sync clock. Closes #237

chimerapy/engine/chimerapyrc.yaml

@@ -39,3 +39,5 @@ config:
     deque-length: 10000
     interval: 10
     logging-enabled: false
+  sync:
+    attempts: 10

chimerapy/engine/clock.py

@@ -0,0 +1,27 @@
+from datetime import datetime, timedelta
+import ntplib
+import time
+
+from chimerapy.engine import config
+
+# Globals
+time_delta = timedelta(0)
+
+
+def sync():
+    global time_delta
+    ntp_client = ntplib.NTPClient()
+    for i in range(config.get("sync.attempts")):
+        try:
+            response = ntp_client.request("pool.ntp.org")
+            time_delta = timedelta(seconds=response.offset)
+        except:
+            time.sleep(0.5)
+
+
+def utcnow() -> datetime:
+    return datetime.utcnow() + time_delta
+
+
+def now() -> datetime:
+    return utcnow()

chimerapy/engine/data_protocols.py

@@ -1,9 +1,10 @@
-import datetime
 from typing import Dict
 from dataclasses import dataclass, field
 
 from dataclasses_json import DataClassJsonMixin
 
+from chimerapy.engine import clock
+
 
 @dataclass
 class NodePubEntry(DataClassJsonMixin):
@@ -19,7 +20,7 @@ class NodePubTable(DataClassJsonMixin):
 @dataclass
 class NodeDiagnostics(DataClassJsonMixin):
     timestamp: str = field(
-        default_factory=lambda: str(datetime.datetime.now().isoformat())
+        default_factory=lambda: str(clock.now().isoformat())
     )  # ISO str
     latency: float = 0  # ms
     payload_size: float = 0  # KB

chimerapy/engine/eventbus/eventbus.py

@@ -1,13 +1,13 @@
 import uuid
 import asyncio
-from datetime import datetime
 from collections import deque
 from concurrent.futures import Future
 from typing import Any, Generic, Type, Callable, Awaitable, Optional, Literal, TypeVar
 
 from aioreactive import AsyncObservable, AsyncObserver, AsyncSubject
 from dataclasses import dataclass, field
 
+from chimerapy.engine import clock
 from .. import _logger
 from ..networking.async_loop_thread import AsyncLoopThread
 
@@ -21,7 +21,7 @@ class Event:
     type: str
     data: Optional[Any] = None
     id: str = field(default_factory=lambda: str(uuid.uuid4()))
-    timestamp: str = field(default_factory=lambda: datetime.utcnow().isoformat())
+    timestamp: str = field(default_factory=lambda: clock.now().isoformat())
 
 
 class EventBus(AsyncObservable):

chimerapy/engine/logger/common.py

@@ -1,10 +1,11 @@
 import logging
-from datetime import datetime
 from logging import Filter, Formatter, Handler, StreamHandler
 from logging.handlers import RotatingFileHandler
 from pathlib import Path
 from typing import Union, Dict
 
+from chimerapy.engine import clock
+
 MAX_BYTES_PER_FILE = 100 * 1024 * 1024  # 100MB
 
 
@@ -117,7 +118,7 @@ def emit(self, record: logging.LogRecord):
     @staticmethod
     def timestamp() -> str:
         """Return the current timestamp in the format YYYY-MM-DD_HH-MM-SS."""
-        return datetime.now().strftime("%Y-%m-%d_%H-%M-%S")
+        return clock.now().strftime("%Y-%m-%d_%H-%M-%S")
 
 
 class MultiplexedRotatingFileHandler(MultiplexedEntityHandler):

chimerapy/engine/manager/http_server_service.py

@@ -1,4 +1,5 @@
 import traceback
+import datetime
 from concurrent.futures import Future
 from typing import List, Dict
 
@@ -143,6 +144,7 @@ async def _register_worker_route(self, request: web.Request):
                 "port": self.port,
             },
             "config": config.config,
+            "manager_datetime_now": datetime.datetime.utcnow().isoformat(),
         }
 
         # Broadcast changes
@@ -168,7 +170,6 @@ async def _update_nodes_status(self, request: web.Request):
             update_dataclass(self.state.workers[worker_state.id], worker_state)
         else:
             logger.error(f"{self}: non-registered Worker update: {worker_state.id}")
-        # logger.debug(f"{self}: Nodes status update to: {self.state.workers}")
 
         return web.HTTPOk()
 

chimerapy/engine/manager/worker_handler_service.py

@@ -105,13 +105,9 @@ def _get_worker_ip(self, worker_id: str) -> str:
 
     async def _register_worker(self, worker_state: WorkerState) -> bool:
 
-        logger.debug(f"{self}: worker_state: {worker_state} BEFORE")
         evented_worker_state = make_evented(
             worker_state, event_bus=self.eventbus, event_name="ManagerState.changed"
         )
-        logger.debug(
-            f"{self}: worker_state: {worker_state}: {evented_worker_state} AFTER"
-        )
         self.state.workers[worker_state.id] = evented_worker_state
         logger.debug(
             f"Manager registered <Worker id={worker_state.id}"

chimerapy/engine/networking/data_chunk.py

@@ -2,14 +2,14 @@
 import pickle
 import uuid
 import blosc
-import datetime
 from typing import Any, Literal, Dict, List
 
 # Third-party Imports
 import numpy as np
 import simplejpeg
 
 # Internal Imports
+from chimerapy.engine import clock
 from chimerapy.engine._logger import getLogger
 
 logger = getLogger("chimerapy-engine")
@@ -40,7 +40,7 @@ def __init__(self):
         self._container["meta"] = {
             "value": {
                 "ownership": [],
-                "created": datetime.datetime.now(),
+                "created": clock.now(),
                 "transmitted": None,
                 "received": None,
             },

chimerapy/engine/node/node.py

@@ -1,7 +1,6 @@
 import pathlib
 import logging
 import uuid
-import datetime
 import os
 import tempfile
 import asyncio
@@ -15,7 +14,7 @@
 
 # Internal Imports
 from chimerapy.engine import _logger
-from chimerapy.engine import config
+from chimerapy.engine import clock
 from ..states import NodeState
 from ..networking import DataChunk
 from ..networking.async_loop_thread import AsyncLoopThread
@@ -89,7 +88,7 @@ def __init__(
         # Generic Node needs
         self.logger: logging.Logger = logging.getLogger("chimerapy-engine-node")
         self.logging_level: int = logging.DEBUG
-        self.start_time = datetime.datetime.now()
+        self.start_time = clock.now()
 
         # Default values
         self.node_config = NodeConfig()
@@ -200,7 +199,7 @@ def save_video(self, name: str, data: np.ndarray, fps: int):
             return False
 
         if self.recorder.enabled:
-            timestamp = datetime.datetime.now()
+            timestamp = clock.now()
             video_entry = {
                 "uuid": uuid.uuid4(),
                 "name": name,
@@ -251,7 +250,7 @@ def save_audio(
                 "channels": channels,
                 "format": format,
                 "rate": rate,
-                "timestamp": datetime.datetime.now(),
+                "timestamp": clock.now(),
             }
             self.recorder.submit(audio_entry)
 
@@ -271,7 +270,7 @@ def save_tabular(
                 "name": name,
                 "data": data,
                 "dtype": "tabular",
-                "timestamp": datetime.datetime.now(),
+                "timestamp": clock.now(),
             }
             self.recorder.submit(tabular_entry)
 
@@ -289,7 +288,7 @@ def save_image(self, name: str, data: np.ndarray):
                 "name": name,
                 "data": data,
                 "dtype": "image",
-                "timestamp": datetime.datetime.now(),
+                "timestamp": clock.now(),
             }
             self.recorder.submit(image_entry)
 
@@ -422,8 +421,6 @@ def run(
             self.worker_comms.in_node_config(
                 state=self.state, eventbus=self.eventbus, logger=self.logger
             )
-            if self.worker_comms.worker_config:
-                config.update_defaults(self.worker_comms.worker_config)
         elif not self.state.logdir:
             self.state.logdir = pathlib.Path(tempfile.mktemp())
 

chimerapy/engine/node/poller_service.py

@@ -1,10 +1,10 @@
 import threading
 import logging
-import datetime
 from typing import Optional, Dict, Tuple, List
 
 import zmq
 
+from chimerapy.engine import clock
 from chimerapy.engine import _logger
 from ..states import NodeState
 from ..networking import Subscriber, DataChunk
@@ -149,7 +149,7 @@ def poll_inputs(self):
                 serial_data_chunk = s.recv()
                 data_chunk = DataChunk.from_bytes(serial_data_chunk)
                 meta = data_chunk.get("meta")
-                meta["value"]["received"] = datetime.datetime.now()
+                meta["value"]["received"] = clock.now()
                 data_chunk.update("meta", meta)
 
                 # Update the latest value

chimerapy/engine/node/processor_service.py

@@ -1,11 +1,11 @@
 import threading
 import traceback
-import datetime
 import logging
 import asyncio
 from typing import Dict, List, Optional, Callable, Coroutine, Any, Literal
 
 from chimerapy.engine import _logger
+from chimerapy.engine import clock
 from ..networking.client import Client
 from ..networking.enums import NODE_MESSAGE
 from ..networking import DataChunk
@@ -285,7 +285,7 @@ async def safe_step(self, data_chunks: Dict[str, DataChunk] = {}):
 
             # Add timestamp and step id to the DataChunk
             meta = output_data_chunk.get("meta")
-            meta["value"]["transmitted"] = datetime.datetime.now()
+            meta["value"]["transmitted"] = clock.now()
             output_data_chunk.update("meta", meta)
 
             # Send out the output to the OutputsHandler

chimerapy/engine/node/profiler_service.py

@@ -1,14 +1,14 @@
 import os
 import pickle
 import logging
-import datetime
 from collections import deque
 from typing import Dict, Optional, Any, List
 
 import pandas as pd
 from psutil import Process
 
 from chimerapy.engine import config
+from chimerapy.engine import clock
 from ..data_protocols import NodeDiagnostics
 from ..async_timer import AsyncTimer
 from ..networking.data_chunk import DataChunk
@@ -79,7 +79,7 @@ async def diagnostics_report(self):
             return None
 
         # Get the timestamp
-        timestamp = datetime.datetime.now().isoformat()
+        timestamp = clock.now().isoformat()
 
         # Get process-wide information
         memory = self.process.memory_info()

chimerapy/engine/node/worker_comms_service.py

@@ -1,8 +1,11 @@
 import pathlib
 import logging
 import tempfile
+import datetime
 from typing import Dict, Optional
 
+from chimerapy.engine import config
+from chimerapy.engine import clock
 from ..networking import Client
 from ..states import NodeState
 from ..networking.enums import GENERAL_MESSAGE, WORKER_MESSAGE, NODE_MESSAGE
@@ -25,6 +28,7 @@ def __init__(
         host: str,
         port: int,
         node_config: NodeConfig,
+        manager_worker_timedelta: Optional[datetime.timedelta] = None,
         worker_logdir: Optional[pathlib.Path] = None,
         worker_config: Optional[Dict] = None,
         logging_level: int = logging.INFO,
@@ -42,6 +46,7 @@ def __init__(
         self.worker_config = worker_config
         self.logging_level = logging_level
         self.node_config = node_config
+        self.manager_worker_timedelta = manager_worker_timedelta
 
         # Optional
         self.state = state
@@ -77,6 +82,13 @@ def in_node_config(
         # Then add observers
         self.add_observers()
 
+        # Update config if possible
+        if self.worker_config:
+            config.update_defaults(self.worker_config)
+
+        # Set clock if possible
+        clock.sync()
+
     def add_observers(self):
         assert self.state and self.eventbus and self.logger
 

chimerapy/engine/worker/events.py

@@ -1,4 +1,5 @@
 import pathlib
+import datetime
 from dataclasses import dataclass, field
 from typing import Dict, Any
 from enum import Enum
@@ -13,6 +14,11 @@ class BroadcastEvent:
     data: Dict[str, Any] = field(default_factory=dict)
 
 
+@dataclass
+class ManagerWorkerTimeDeltaEvent:
+    manager_worker_timedelta: datetime.timedelta
+
+
 @dataclass
 class SendMessageEvent:
     client_id: str