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@Computational-Plant-Science

Computational Plant Science Lab

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  1. 3D_Sorghum_phenotyping_pipeline 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Python

  2. 3D_model_traits_demo 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Python 6 1

  3. AI_U2net_color_clustering AI_U2net_color_clustering Public

    A machine learning model U2net and opencv based color clsutering method hat performs object segmentation in a single shot

    Python

  4. 3d_sorghum_segmentation 3d_sorghum_segmentation Public

    A machine learning model U2net and opencv based color clustering method that performs object segmentation in a single shot

    Python

  5. 3D_colmap 3D_colmap Public

    General-purpose Structure-from-Motion (SfM) and Multi-View Stereo (MVS) pipeline using COLMAP

    Python

  6. ml_smart_docker ml_smart_docker Public

    Docker container for smart

    Python

Repositories

Showing 10 of 40 repositories
  • sorghum_results_analysis Public
    Computational-Plant-Science/sorghum_results_analysis’s past year of commit activity
    Python 0 0 0 0 Updated Mar 10, 2025
  • 3D_beanroot_phenotyping_pipeline Public
    Computational-Plant-Science/3D_beanroot_phenotyping_pipeline’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Mar 10, 2025
  • DIRT-Pop.v1 Public
    Computational-Plant-Science/DIRT-Pop.v1’s past year of commit activity
    R 0 0 0 0 Updated Mar 7, 2025
  • 3d_sorghum_segmentation Public

    A machine learning model U2net and opencv based color clustering method that performs object segmentation in a single shot

    Computational-Plant-Science/3d_sorghum_segmentation’s past year of commit activity
    Python 0 BSD-2-Clause 0 0 0 Updated Mar 4, 2025
  • 3D_colmap Public

    General-purpose Structure-from-Motion (SfM) and Multi-View Stereo (MVS) pipeline using COLMAP

    Computational-Plant-Science/3D_colmap’s past year of commit activity
    Python 0 0 0 0 Updated Feb 28, 2025
  • 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Computational-Plant-Science/3D_model_traits_demo’s past year of commit activity
    Python 6 1 2 0 Updated Feb 26, 2025
  • 3D_model_reconstruction_demo Public

    Implementation of the 3D reconstruction pipeline optimized for plant branching structures.

    Computational-Plant-Science/3D_model_reconstruction_demo’s past year of commit activity
    C 16 GPL-3.0 4 2 0 Updated Feb 24, 2025
  • colmap_test_dev Public
    Computational-Plant-Science/colmap_test_dev’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Feb 23, 2025
  • 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Computational-Plant-Science/3D_Sorghum_phenotyping_pipeline’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Feb 20, 2025
  • ml_smart_release Public

    SMART software release version

    Computational-Plant-Science/ml_smart_release’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Jan 9, 2025
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