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Add Hit Merging Step to default NDLAr Flow Runner Script (for Pandora) #68

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Add Hit Merging Step to default NDLAr Flow Runner Script (for Pandora) #68

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15 changes: 8 additions & 7 deletions run-ndlar-flow/run_ndlar_flow_ndlar.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -34,28 +34,29 @@ workflow1='yamls/ndlar_flow/workflows/charge/charge_event_building_mc.yaml'
workflow2='yamls/ndlar_flow/workflows/charge/charge_event_reconstruction_mc.yaml'
workflow3='yamls/ndlar_flow/workflows/combined/combined_reconstruction_mc.yaml'
workflow4='yamls/ndlar_flow/workflows/charge/prompt_calibration_mc.yaml'
workflow5='yamls/ndlar_flow/workflows/charge/final_calibration_mc.yaml'
workflow5='yamls/ndlar_flow/workflows/charge/merged_calibration_mc.yaml'
workflow6='yamls/ndlar_flow/workflows/charge/final_calibration_mc.yaml'

# light workflows
workflow6='yamls/ndlar_flow/workflows/light/light_event_building_mc.yaml'
workflow7='yamls/ndlar_flow/workflows/light/light_event_reconstruction_mc.yaml'
workflow7='yamls/ndlar_flow/workflows/light/light_event_building_mc.yaml'
workflow8='yamls/ndlar_flow/workflows/light/light_event_reconstruction_mc.yaml'

# charge-light trigger matching
workflow8='yamls/ndlar_flow/workflows/charge/charge_light_assoc_mc.yaml'
workflow9='yamls/ndlar_flow/workflows/charge/charge_light_assoc_mc.yaml'

cd "$ND_PRODUCTION_INSTALL_DIR"/ndlar_flow

# Ensure that the second h5flow doesn't run if the first one crashes. This also
# ensures that we properly report the failure to the production system.
set -o errexit

run h5flow -c $workflow1 $workflow2 $workflow3 $workflow4 $workflow5\
run h5flow -c $workflow1 $workflow2 $workflow3 $workflow4 $workflow5 $workflow6\
-i "$inFile" -o "$outFile" $compression

run h5flow -c $workflow6 $workflow7\
run h5flow -c $workflow7 $workflow8\
-i "$inFile" -o "$outFile" $compression

run h5flow -c $workflow8\
run h5flow -c $workflow9\
-i "$outFile" -o "$outFile" $compression

mkdir -p "$outDir/FLOW/$subDir"
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