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@DigitalSlideArchive

Digital Slide Archive

Tools for the management, visualization, and analysis of digital pathology data.

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  1. digital_slide_archive digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    Python 113 53

  2. HistomicsTK HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    Python 411 118

  3. HistomicsUI HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    JavaScript 65 22

Repositories

Showing 10 of 36 repositories
  • dive-dsa Public

    DIVE for Digital Slide Archive

    DigitalSlideArchive/dive-dsa’s past year of commit activity
    Vue 1 Apache-2.0 0 4 2 Updated Mar 7, 2025
  • tifftools Public

    Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.

    DigitalSlideArchive/tifftools’s past year of commit activity
    Python 51 6 4 0 Updated Mar 7, 2025
  • ImageDePHI Public
    DigitalSlideArchive/ImageDePHI’s past year of commit activity
    Python 9 Apache-2.0 0 17 1 Updated Mar 6, 2025
  • large-image-utilities Public

    Experimental utilities for use with large_image

    DigitalSlideArchive/large-image-utilities’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Mar 6, 2025
  • HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    DigitalSlideArchive/HistomicsUI’s past year of commit activity
    JavaScript 65 Apache-2.0 22 50 1 Updated Mar 6, 2025
  • digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    DigitalSlideArchive/digital_slide_archive’s past year of commit activity
    Python 113 Apache-2.0 53 29 0 Updated Mar 6, 2025
  • girder_assetstore Public

    A Girder plugin for connecting remote Girder instances as Assetstores

    DigitalSlideArchive/girder_assetstore’s past year of commit activity
    Python 0 0 4 0 Updated Mar 5, 2025
  • wsi-superpixel-guided-labeling Public
    DigitalSlideArchive/wsi-superpixel-guided-labeling’s past year of commit activity
    Vue 3 6 31 0 Updated Mar 4, 2025
  • HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    DigitalSlideArchive/HistomicsTK’s past year of commit activity
    Python 411 Apache-2.0 118 22 1 Updated Mar 3, 2025
  • DSA-WSI-DeID Public

    A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.

    DigitalSlideArchive/DSA-WSI-DeID’s past year of commit activity
    Python 15 Apache-2.0 8 15 0 Updated Mar 3, 2025
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