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@DigitalSlideArchive

Digital Slide Archive

Tools for the management, visualization, and analysis of digital pathology data.

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  1. digital_slide_archive digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    Python 117 56

  2. HistomicsTK HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    Python 415 120

  3. HistomicsUI HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    JavaScript 68 24

Repositories

Showing 10 of 36 repositories
  • HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    DigitalSlideArchive/HistomicsUI’s past year of commit activity
    JavaScript 68 Apache-2.0 24 53 1 Updated Apr 10, 2025
  • digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    DigitalSlideArchive/digital_slide_archive’s past year of commit activity
    Python 117 Apache-2.0 56 25 0 Updated Apr 10, 2025
  • tifftools Public

    Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.

    DigitalSlideArchive/tifftools’s past year of commit activity
    Python 53 6 5 1 Updated Apr 10, 2025
  • dive-dsa Public

    DIVE for Digital Slide Archive

    DigitalSlideArchive/dive-dsa’s past year of commit activity
    Vue 1 Apache-2.0 0 5 3 Updated Apr 10, 2025
  • DSA-WSI-DeID Public

    A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.

    DigitalSlideArchive/DSA-WSI-DeID’s past year of commit activity
    Python 16 Apache-2.0 8 15 0 Updated Apr 9, 2025
  • wsi-superpixel-guided-labeling Public
    DigitalSlideArchive/wsi-superpixel-guided-labeling’s past year of commit activity
    Vue 3 6 24 0 Updated Apr 8, 2025
  • girder_volview Public
    DigitalSlideArchive/girder_volview’s past year of commit activity
    Python 3 2 6 0 Updated Apr 3, 2025
  • superpixel-classification Public

    A test cli for classifying superpixels with arbitrary labels

    DigitalSlideArchive/superpixel-classification’s past year of commit activity
    Python 5 4 0 0 Updated Apr 3, 2025
  • large-image-utilities Public

    Experimental utilities for use with large_image

    DigitalSlideArchive/large-image-utilities’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Apr 1, 2025
  • HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    DigitalSlideArchive/HistomicsTK’s past year of commit activity
    Python 415 Apache-2.0 120 22 1 Updated Mar 31, 2025
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