Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Removing hardcoded paths. #458

Merged
merged 2 commits into from
Mar 6, 2025
Merged

Removing hardcoded paths. #458

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
c6d20be
Replacing hardcoded patsh with generic ones
Joao-L-S-Almeida Feb 25, 2025
6bf450b
Replacing hardcoded paths with generic ones
Joao-L-S-Almeida Feb 25, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
24 changes: 12 additions & 12 deletions examples/confs/dofa_sen1floods11_fcn.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ trainer:
logger:
class_path: TensorBoardLogger
init_args:
save_dir: /dccstor/geofm-finetuning/carlosgomes/torchgeo_floods
save_dir: /path/experiment/user/torchgeo_floods
name: dofa
callbacks:
- class_path: RichProgressBar
Expand All @@ -23,7 +23,7 @@ trainer:
check_val_every_n_epoch: 1
log_every_n_steps: 50
enable_checkpointing: true
default_root_dir: /dccstor/geofm-finetuning/carlosgomes/torchgeo_floods
default_root_dir: /path/experiment/user/torchgeo_floods
data:
class_path: GenericNonGeoSegmentationDataModule
init_args:
Expand Down Expand Up @@ -55,16 +55,16 @@ data:
- 2
- 1
- 0
train_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
train_label_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
val_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
val_label_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
test_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
test_label_data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
train_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
train_label_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
val_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
val_label_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
test_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/S2Hand/
test_label_data_root: /path/experiment/flood_mapping/sen1floods11/data/data/flood_events/HandLabeled/LabelHand
# these must be obtained by running terratorch/examples/scripts/convert_sen1floods11_splits.py on the original split csv files
train_split: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_train_data_S2.txt
test_split: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_test_data_S2.txt
val_split: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_valid_data_S2.txt
train_split: /path/experiment/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_train_data_S2.txt
test_split: /path/experiment/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_test_data_S2.txt
val_split: /path/experiment/flood_mapping/sen1floods11/splits/splits/flood_handlabeled/flood_valid_data_S2.txt
img_grep: "*_S2Hand.tif"
label_grep: "*_LabelHand.tif"
no_label_replace: -1
Expand Down Expand Up @@ -129,7 +129,7 @@ data:
# - class_path: ToTensorV2

# dict_kwargs:
# data_root: /dccstor/geofm-finetuning/flood_mapping/sen1floods11/
# data_root: /path/experiment/flood_mapping/sen1floods11/
# bands:
# - 1
# - 2
Expand Down
24 changes: 12 additions & 12 deletions examples/confs/granite-wxc-merra2-downscale-small-config.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -97,10 +97,10 @@ data:
input_size_lon: 96 # 6x coarsening
apply_smoothen: True
dict_kwargs:
data_path_surface: /home/jalmeida/Projetos/terratorch/examples/scripts/merra-2/
data_path_vertical: /home/jalmeida/Projetos/terratorch/examples/scripts/merra-2/
climatology_path_surface: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/
climatology_path_vertical: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/
data_path_surface: /path/experiment/Projetos/terratorch/examples/scripts/merra-2/
data_path_vertical: /path/experiment/Projetos/terratorch/examples/scripts/merra-2/
climatology_path_surface: /path/experiment/Projetos/terratorch/examples/scripts/climatology/
climatology_path_vertical: /path/experiment/Projetos/terratorch/examples/scripts/climatology/
time_range:
- '2020-01-01'
- '2020-01-02'
Expand Down Expand Up @@ -129,10 +129,10 @@ model:
output_vars:
- T2M # near surface temperature
type: merra2
input_scalers_surface_path: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/musigma_surface.nc
input_scalers_vertical_path: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/musigma_vertical.nc
output_scalers_surface_path: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/anomaly_variance_surface.nc
output_scalers_vertical_path: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/anomaly_variance_vertical.nc
input_scalers_surface_path: /path/experiment/Projetos/terratorch/examples/scripts/climatology/musigma_surface.nc
input_scalers_vertical_path: /path/experiment/Projetos/terratorch/examples/scripts/climatology/musigma_vertical.nc
output_scalers_surface_path: /path/experiment/Projetos/terratorch/examples/scripts/climatology/anomaly_variance_surface.nc
output_scalers_vertical_path: /path/experiment/Projetos/terratorch/examples/scripts/climatology/anomaly_variance_vertical.nc
input_levels: [34.0, 39.0, 41.0, 43.0, 44.0, 45.0, 48.0, 53.0, 56.0, 63.0, 68.0, 72.0]
downscaling_patch_size: [2, 2]
n_input_timestamps: 2
Expand All @@ -147,10 +147,10 @@ model:
input_size_lon: 96 # 6x coarsening
freeze_backbone: True
freeze_decoder: False
data_path_surface: /home/jalmeida/Projetos/terratorch/examples/scripts/merra-2/
data_path_vertical: /home/jalmeida/Projetos/terratorch/examples/scripts/merra-2/
climatology_path_surface: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/
climatology_path_vertical: /home/jalmeida/Projetos/terratorch/examples/scripts/climatology/
data_path_surface: /path/experiment/Projetos/terratorch/examples/scripts/merra-2/
data_path_vertical: /path/experiment/Projetos/terratorch/examples/scripts/merra-2/
climatology_path_surface: /path/experiment/Projetos/terratorch/examples/scripts/climatology/
climatology_path_vertical: /path/experiment/Projetos/terratorch/examples/scripts/climatology/
model_config:
num_epochs: 200
limit_steps_train: 250
Expand Down
4 changes: 2 additions & 2 deletions examples/confs/wxc-gravity-wave-ccc.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -31,8 +31,8 @@ trainer:
data:
class_path: terratorch.datamodules.era5.ERA5DataModule
init_args:
train_data_path: /dccstor/terratorch/users/rkie/gitco/terratorch
valid_data_path: /dccstor/terratorch/users/rkie/gitco/terratorch
train_data_path: /path/terratorch/user/gitco/terratorch
valid_data_path: /path/terratorch/user/gitco/terratorch
file_glob_pattern: "wxc_input_u_v_t_p_output_theta_uw_vw_*.nc"

model:
Expand Down