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Integrate CliqueTrees.jl #878

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Integrate CliqueTrees.jl #878

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7ad90b5
Integrate CliqueTrees.jl.
samuelsonric Feb 18, 2026
1742c98
Improve performance.
samuelsonric Feb 20, 2026
6cbd282
Gradient computation.
samuelsonric Mar 2, 2026
90072df
Merge branch 'main' into main
palday Mar 10, 2026
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2 changes: 2 additions & 0 deletions Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,7 @@ version = "5.3.0"
[deps]
Arrow = "69666777-d1a9-59fb-9406-91d4454c9d45"
BSplineKit = "093aae92-e908-43d7-9660-e50ee39d5a0a"
CliqueTrees = "60701a23-6482-424a-84db-faee86b9b1f8"
Compat = "34da2185-b29b-5c13-b0c7-acf172513d20"
DataAPI = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
Expand Down Expand Up @@ -47,6 +48,7 @@ Aqua = "0.8"
Arrow = "1, 2"
BSplineKit = "0.17, 0.18, 0.19"
CategoricalArrays = "0.10, 1"
CliqueTrees = "1.16.3"
Compat = "4.10"
DataAPI = "1"
DataFrames = "1"
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5 changes: 5 additions & 0 deletions src/MixedModels.jl
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Expand Up @@ -48,6 +48,10 @@ using StructTypes: StructTypes
using Tables: Tables, columntable
using TypedTables: TypedTables, DictTable, FlexTable, Table

using CliqueTrees: cliquetree, cliquetree!
using CliqueTrees.Multifrontal: ChordalCholesky, ChordalSymbolic, flatindices, setflatindex!, getflatindex
using CliqueTrees.Multifrontal: nfr, diagblock, offdblock, selinv!, cholesky!

export @formula,
AbstractReMat,
Bernoulli,
Expand Down Expand Up @@ -220,6 +224,7 @@ include("MixedModelsNLoptExt.jl")
using .MixedModelsNLoptExt

include("derivatives.jl")
include("cliquetrees.jl")

# aliases with non-unicode function names
const settheta! = setθ!
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