No IRAF, new nonlinearity and distortion solutions, and fixed image rotation#55

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nsabrams wants to merge 236 commits into

mainfrom

Commits on Jun 2, 2022

Updated weather files
Abhimat Krishna Gautam
committed
Merging remote changes
abhimat
committed

Commits on Jun 28, 2022

Adding linearity correction coeffs instruments and NIRC2
abhimat
committed

Commits on Jun 29, 2022

Commits on Jul 5, 2022

Added linearity correction darks and flats
abhimat
committed

Commits on Jul 8, 2022

Fix import for updated flats and darks funciton
abhimat
committed

Commits on Jul 29, 2022

Commits on Aug 23, 2022

Added non-linearity correction for Lp skies (function: makesky_lp)
abhimat
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Commits on Oct 11, 2022

Commits on Oct 12, 2022

Commits on Oct 31, 2022

Add OSIRIS imager distortion solution.
Matthew-Freeman
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Commits on Nov 4, 2022

Merge pull request #21 from Matthew-Freeman/dev
abhimat
authored

Commits on Jan 28, 2023

Correct OSIRIS distortion date
Matthew-Freeman
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Correct OSIRIS distortion date to Nov 16th
Matthew-Freeman
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A mess of changes
Matthew Freeman
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Commits on Mar 27, 2023

Merge pull request #22 from Matthew-Freeman/dev
jluastro
authored

Commits on Mar 30, 2023

Commits on Mar 31, 2023

Implement darks and make non-lin correction non-optional
abhimat
committed

Commits on Apr 5, 2023

Small bug fixes in makeflat() code
abhimat
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Commits on Apr 7, 2023

Commits on May 9, 2023

Cleaning up and changed from IRAF directory cd to OS
jluastro
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Added PA calculation when in PCU mode.
Matthew Freeman
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Commits on May 10, 2023

Merge remote-tracking branch 'refs/remotes/origin/dev' into dev
Matthew Freeman
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Commits on May 15, 2023

Commits on May 30, 2023

Commits on Jun 13, 2023

Added PCU variant to get_position_angle
Matthew Freeman
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Commits on Jun 14, 2023

Coo files now work with the PCU. But not the rCoo files.
Matthew Freeman
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Commits on Jul 5, 2023

Commits on Jul 7, 2023

Bug fixes and swapped os.chdir for ir.cd due to issues
Sean Granados
committed

Commits on Jul 11, 2023

replaced the use of pyraf for dealing with Lp skies due to header issues
Upsilonlabsean
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Commits on Jul 13, 2023

Working on using PCU data.
Matthew Freeman
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Commits on Jul 14, 2023

added code to copy raw sky files into reduce sky directory for lp
Upsilonlabsean
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Commits on Jul 18, 2023

Updated default photometric calibrator stars in analysis.py
abhimat
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Commits on Aug 4, 2023

Applying Zo’s fixes for accel align
abhimat
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Commits on Sep 15, 2023

Commits on Sep 22, 2023

Commits on Sep 28, 2023

Initial support for running stf on main and submaps in parallel
abhimat
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Commits on Sep 29, 2023

Commits on Oct 5, 2023

make idl call work with multiple stf iterations in PSF creation
zohaggard
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Commits on Oct 6, 2023

updates to correlation to work with mult. iters
zohaggard
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Commits on Oct 19, 2023

nothing much
jluastro
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merging
jluastro
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Commits on Oct 20, 2023

Added labellist_accel=FAlse to all object analysis classes
jluastro
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Commits on Oct 30, 2023

Updating PA change to OSIRIS data. PA_IMAG header keyword didn't account for the image flipping.
jluastro
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Commits on Nov 3, 2023

Commits on Nov 14, 2023

added if statement for self.stfFlags to fix small bug with trailing comma
seangranados
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Commits on Nov 16, 2023

Finished calib.py iraf removal and testing. Updated calib.py to have reduce_dir passed in for different directory structures. Started on sky.py removal of iraf (not done yet).
jluastro
committed

Commits on Nov 28, 2023

Finished sky.py iraf removal and testing. Updated sky.py to have reduce_dir passed in for different directory structures. Removed makesky_lp2 and makesky_lp_fromsci as the behavior was duplicative.…
jluastro
committed

Commits on Nov 30, 2023

Made some changes in data.py to switch over to using the new util.imarith. Also fixed long-path issues with drizzle. These will ultimately be super-ceded by Sean Terry's branch (removing IRAF drizz…
jluastro
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Commits on Dec 6, 2023

Commits on Dec 12, 2023

Commits on Dec 13, 2023

update iraf.imcntr() to scipy.ndimage.center_of_mass()
skterry
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Commits on Dec 14, 2023

more pydriz conversions
skterry
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Commits on Jan 2, 2024

Merge branch 'noiraf' into pydriz
jluastro
authored

Commits on Mar 5, 2024

fixed import of photutils
nsabrams
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Commits on May 13, 2024

Commits on May 16, 2024

Commits on May 21, 2024

Commits on Jul 18, 2024

updates to no iraf cosmicrays
nsabrams
committed

Commits on Jul 26, 2024

2024 weather
abhimat
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Commits on Aug 8, 2024

Generalizing retrieval of MJD from data file headers
abhimat
committed

Commits on Dec 12, 2024

added test that makes sure the replaced values aren't too far off in cosmicrays
nsabrams
committed

Commits on Dec 16, 2024

Update default calibrator stars
abhimat
committed

Commits on Feb 7, 2025

Commits on Feb 10, 2025

removed iraf from skyLp
nsabrams
committed

Commits on Feb 15, 2025

added test for clean_drizzle and made dar apply
nsabrams
committed

Commits on Feb 19, 2025

add back makesky_iraf for testing
nsabrams
committed

Commits on Mar 10, 2025

Commits on Mar 11, 2025

combine drizzle apply mask, add tests, and add log
nsabrams
committed

Commits on Apr 17, 2025

updates to tests, error messages, and fixing bugs to run osiris
nsabrams
committed

Commits on Apr 26, 2025

Merge pull request #35 from Keck-DataReductionPipelines/nirc2_el_upg
abhimat
authored

Commits on Apr 30, 2025

turn off debug plot for image registration
nsabrams
committed

Commits on May 18, 2025

debug image centroiding
kmzzhang
authored

Commits on May 20, 2025

Merge pull request #37 from kmzzhang/patch-1
nsabrams
authored

Commits on May 22, 2025

Commits on May 24, 2025

Commits on May 28, 2025

added lp if statement for calibration sources and instrument.name fix
seangranados
committed

Commits on Jun 12, 2025

adjusted cr thresholds
nsabrams
committed

Commits on Jun 13, 2025

removed unused first pass of drizzle implementation
nsabrams
committed

Commits on Jul 8, 2025

Commits on Jul 9, 2025

Commits on Jul 11, 2025

commented out broken version recording
nsabrams
committed

Commits on Jul 14, 2025

Commits on Jul 17, 2025

ensure images don't have the SCI extenstion which would break in starfinder
nsabrams
committed

Commits on Jul 18, 2025

Commits on Jul 24, 2025

Commits on Aug 1, 2025

Commits on Aug 18, 2025

Commits on Aug 27, 2025

Commits on Aug 30, 2025

Commits on Sep 8, 2025

add plot circle option to plot_starlist_on_image_pixel
nsabrams
committed

Commits on Sep 11, 2025

Commits on Sep 18, 2025

add option to plot circles on pixel image
nsabrams
committed

Commits on Sep 25, 2025

Merging with new PCU distoriton solutions
jluastro
committed

Commits on Sep 29, 2025

debug new osiris distortion solution implementation
Macy Huston
committed

Commits on Oct 7, 2025

Change to OSIRIS sat levels from Zoe. Update to use different units for saturation levels DN vs DN/coadd
nsabrams
committed

Commits on Oct 14, 2025

added temp fix for changed rotator angle
nsabrams
committed

Commits on Oct 20, 2025

Commits on Jan 4, 2026

fixed rotation
nsabrams
committed

Commits on Jan 7, 2026

fixed coo bug from rotation implementaiton
nsabrams
committed

Commits on Jan 15, 2026

add option to trim on strehl
nsabrams
committed

Commits on Jan 23, 2026

Commits on Jan 27, 2026

Added compatibility for OSIRIS spectrograph flatten data
seangranados
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Commits on Jan 28, 2026

Added compatibility for 512x512 images
seangranados
committed

Commits on Jan 29, 2026

Commits on Feb 7, 2026

Final testing of the new phase cross correlation method... improved timing and accuracy.
jluastro
committed

Commits on Feb 10, 2026

Commits on Apr 28, 2026

debug makelog-- only grab real image files
Macy Huston
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remove 'i' requirement for makelog files
Macy Huston
committed

Commits on May 9, 2026