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Pull requests: NCATSTranslator/Babel

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Pull requests list

Add Triage.md documenting sprint-based issue triage process
#685 opened Mar 6, 2026 by gaurav • Draft
Add Development document describing how to develop on Babel
#684 opened Mar 5, 2026 by gaurav Loading…
Add UMLS report generator
#683 opened Mar 5, 2026 by gaurav • Draft
1
Improve time and memory tracking for Babel runs
#679 opened Feb 27, 2026 by gaurav Loading…
2
Add generic SQL report system for drop-in .sql report files
#671 opened Feb 24, 2026 by gaurav • Draft
1 task
5
Exclude MeSH/DrugBank chemical identifiers when preparing proteins
#670 opened Feb 23, 2026 by gaurav • Draft
Added columns for curie_prefix and clique_leader_prefix to Node and Edge
#669 opened Feb 23, 2026 by gaurav Loading…
1
3
Added additional umlsmap entries to protein compendium
#668 opened Feb 23, 2026 by gaurav Loading…
Add contributors
#615 opened Nov 7, 2025 by gaurav • Draft
Improve Biolink type reporting
#589 opened Sep 25, 2025 by gaurav • Draft
3 tasks
Feat/use rust for datacollect
#588 opened Sep 25, 2025 by gaurav • Draft
1
Fix chembl issue 584
#585 opened Sep 23, 2025 by gaurav • Draft
1
Eliminate duplicate UMLS type warnings
#565 opened Sep 9, 2025 by gaurav Loading…
8
Bulk normalize
#564 opened Sep 9, 2025 by gaurav • Draft
Add CLI normalizer
#503 opened Aug 28, 2025 by gaurav • Draft
Moved UMLSToBiolinkTypeConverter into umls.py
#445 opened May 19, 2025 by gaurav • Draft
Added a basic SSSOM to Concord converter
#439 opened May 1, 2025 by gaurav • Draft
Add a comparator script
#381 opened Dec 16, 2024 by gaurav Loading…
1
Adding SSSOM export
#328 opened Aug 4, 2024 by gaurav • Draft
1
Add Mammalian Phenotype Ontology
#300 opened Jul 1, 2024 by gaurav Loading…
1
1
Add PharmGKB
#219 opened Dec 11, 2023 by gaurav • Draft
GeneProtein synonym conflation
#185 opened Sep 5, 2023 by gaurav • Draft
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