Skip to content

Number of unique peptides per protein #2030

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
SamueldelaCamaraFuentes opened this issue Feb 19, 2025 · 1 comment
Closed

Number of unique peptides per protein #2030

SamueldelaCamaraFuentes opened this issue Feb 19, 2025 · 1 comment

Comments

@SamueldelaCamaraFuentes

- Describe the feature:

Dear FragPipe team I have been analysing label free data generated using your platform the last few years and I miss a column in the "combined_protein.tsv" with the number of unique peptides identified per protein. This suprises me because the number of unique peptides is reported in the "protein.tsv" file generated for every sample included in the analysis but then are not taken into account when building the "combined_protein.tsv".

Could this feature be implemented in FragPipe soon or it is a feature already implemented that I have not seen?

Thank you so much in advance,
Samuel

@fcyu
Copy link
Member

fcyu commented Feb 19, 2025

Duplicate of #1808

@fcyu fcyu marked this as a duplicate of #1808 Feb 19, 2025
@fcyu fcyu closed this as completed Feb 19, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants