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DIA_SpecLib_Quant No name for protein identification Bis #2060

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Angrist75 opened this issue Mar 1, 2025 · 2 comments
Open

DIA_SpecLib_Quant No name for protein identification Bis #2060

Angrist75 opened this issue Mar 1, 2025 · 2 comments
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@Angrist75
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log_2025-02-26_23-47-21.txt

Hi
as previously reported, we have encountered a problem in getting the protein name when DIA_SpectLib_Quant workflow is launched, contrary to what happens when DIANN is left alone. I did not understand from previous answers how to solve this problem.
Thanks!
best regards,
sachin

@fcyu fcyu self-assigned this Mar 1, 2025
@fcyu
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fcyu commented Mar 1, 2025

Thank you for reaching out to us.

The error was because the new version of DIA-NN, which was released after FragPipie was released, has a slightly different format than the old version. The error won't affect the results too much, just missing some "auxiliary" columns.

Same issue as #1998 and #2050

Best,

Fengchao

@Angrist75
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thanks a lot
andrea :)

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