Clean up .bib file

paper.bib

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+@article{Matplotlib_2007,
+	author = {Hunter, John D.},
+	doi = {10.1109/MCSE.2007.55},
+	journal = {Computing in Science & Engineering},
+	keywords = {Graphics;Interpolation;Equations;Graphical user interfaces;Packaging;Image generation;User interfaces;Operating systems;Computer languages;Programming profession;Python;scripting languages;application development;scientific programming},
+	number = {3},
+	pages = {90-95},
+	title = {Matplotlib: A 2D Graphics Environment},
+	volume = {9},
+	year = {2007},
+	bdsk-url-1 = {https://doi.org/10.1109/MCSE.2007.55}}
+
+@inproceedings{McKinney-2010,
+	author = {{W}es {M}c{K}inney},
+	booktitle = {{P}roceedings of the 9th {P}ython in {S}cience {C}onference},
+	doi = {10.25080/Majora-92bf1922-00a},
+	editor = {{S}t\'efan van der {W}alt and {J}arrod {M}illman},
+	pages = {56 - 61},
+	title = {{D}ata {S}tructures for {S}tatistical {C}omputing in {P}ython},
+	year = {2010},
+	bdsk-url-1 = {https://doi.org/10.25080/Majora-92bf1922-00a}}
+
+@inproceedings{binder-2018,
+	author = {{Project Jupyter} and {M}atthias {B}ussonnier and {J}essica {F}orde and {J}eremy {F}reeman and {B}rian {G}ranger and {T}im {H}ead and {C}hris {H}oldgraf and {K}yle {K}elley and {G}ladys {N}alvarte and {A}ndrew {O}sheroff and {M} {P}acer and {Y}uvi {P}anda and {F}ernando {P}erez and {B}enjamin {R}agan-{K}elley and {C}arol {W}illing},
+	booktitle = {{P}roceedings of the 17th {P}ython in {S}cience {C}onference},
+	doi = {10.25080/Majora-4af1f417-011},
+	editor = {{F}atih {A}kici and {D}avid {L}ippa and {D}illon {N}iederhut and {M} {P}acer},
+	pages = {113 - 120},
+	title = {{B}inder 2.0 - {R}eproducible, interactive, sharable environments for science at scale},
+	year = {2018},
+	bdsk-url-1 = {https://doi.org/10.25080/Majora-4af1f417-011}}
+
+@inproceedings{boerner_access_2023,
+	address = {New York, NY, USA},
+	author = {Boerner, Timothy J. and Deems, Stephen and Furlani, Thomas R. and Knuth, Shelley L. and Towns, John},
+	booktitle = {Practice and {Experience} in {Advanced} {Research} {Computing} 2023: {Computing} for the {Common} {Good}},
+	doi = {10.1145/3569951.3597559},
+	isbn = {978-1-4503-9985-2},
+	month = sep,
+	pages = {173--176},
+	publisher = {Association for Computing Machinery},
+	series = {{PEARC} '23},
+	shorttitle = {{ACCESS}},
+	title = {{ACCESS}: {Advancing} {Innovation}: {NSF}'s {Advanced} {Cyberinfrastructure} {Coordination} {Ecosystem}: {Services} \& {Support}},
+	url = {https://dl.acm.org/doi/10.1145/3569951.3597559},
+	urldate = {2025-03-08},
+	year = {2023},
+	bdsk-url-1 = {https://dl.acm.org/doi/10.1145/3569951.3597559},
+	bdsk-url-2 = {https://doi.org/10.1145/3569951.3597559}}
+
+@inproceedings{hancock_jetstream2_2021,
+	address = {New York, NY, USA},
+	author = {Hancock, David Y. and Fischer, Jeremy and Lowe, John Michael and Snapp-Childs, Winona and Pierce, Marlon and Marru, Suresh and Coulter, J. Eric and Vaughn, Matthew and Beck, Brian and Merchant, Nirav and Skidmore, Edwin and Jacobs, Gwen},
+	booktitle = {Practice and {Experience} in {Advanced} {Research} {Computing} 2021: {Evolution} {Across} {All} {Dimensions}},
+	doi = {10.1145/3437359.3465565},
+	isbn = {978-1-4503-8292-2},
+	month = jul,
+	pages = {1--8},
+	publisher = {Association for Computing Machinery},
+	series = {{PEARC} '21},
+	shorttitle = {Jetstream2},
+	title = {Jetstream2: {Accelerating} cloud computing via {Jetstream}},
+	url = {https://dl.acm.org/doi/10.1145/3437359.3465565},
+	urldate = {2025-03-08},
+	year = {2021},
+	bdsk-url-1 = {https://dl.acm.org/doi/10.1145/3437359.3465565},
+	bdsk-url-2 = {https://doi.org/10.1145/3437359.3465565}}
+
+@article{cockett_continuous_2024,
+	author = {Cockett, Rowan and Purves, Steve and Koch, Franklin and Morrison, Mike},
+	doi = {10.25080/NKVC9349},
+	issn = {2575-9752},
+	journal = {scipy},
+	language = {en},
+	month = jun,
+	pages = {121--136},
+	title = {Continuous {Tools} for {Scientific} {Publishing}},
+	url = {https://proceedings.scipy.org/articles/NKVC9349},
+	urldate = {2025-02-06},
+	year = {2024},
+	bdsk-url-1 = {https://proceedings.scipy.org/articles/NKVC9349},
+	bdsk-url-2 = {https://doi.org/10.25080/NKVC9349}}
+
+@misc{mystmd_2025,
+	author = {Rowan Cockett and Franklin Koch and Steve Purves and Angus Hollands and Yuxi Wang and Dylan Grandmont and Chris Holdgraf and Andrea and Jan-Hendrik M{\"u}ller and Spencer Lyon and Cristian Le and Jim Madge and wwx and Sugan Reden and Yuanhao Geng and Ryan Lovett and Mikkel Roald-Arb{\o}l and Matt McKay and Matthew Brett and M Bussonnier and Mridul Seth and Nicolas M. Thi{\'e}ry and Raniere Silva and Sarah Brown and Sinan Bekar and Tavin Cole and Thad Guidry and Toby Driscoll},
+	copyright = {MIT License},
+	doi = {10.5281/ZENODO.14805610},
+	month = feb,
+	publisher = {Zenodo},
+	shorttitle = {jupyter-book/mystmd},
+	title = {mystmd v1.4.0},
+	url = {https://zenodo.org/doi/10.5281/zenodo.14805610},
+	urldate = {2025-03-08},
+	year = {2025},
+	bdsk-url-1 = {https://zenodo.org/doi/10.5281/zenodo.14805610},
+	bdsk-url-2 = {https://doi.org/10.5281/ZENODO.14805610}}
+
+@misc{jupyterbook_2020,
+	author = {{Executable Books Community}},
+	copyright = {Open Access},
+	doi = {10.5281/ZENODO.2561065},
+	keywords = {data science, jupyter, publishing, scholarship},
+	month = feb,
+	publisher = {Zenodo},
+	title = {Jupyter {Book}},
+	url = {https://zenodo.org/record/2561065},
+	urldate = {2025-03-08},
+	year = {2020},
+	bdsk-url-1 = {https://zenodo.org/record/2561065},
+	bdsk-url-2 = {https://doi.org/10.5281/ZENODO.2561065}}
+
+@misc{atmoscol2023,
+	author = {Alfonso Ladino and Nicole Rivera and Max Grover},
+	copyright = {Creative Commons Attribution 4.0 International},
+	doi = {10.5281/ZENODO.8316796},
+	month = oct,
+	publisher = {Zenodo},
+	shorttitle = {aladinor/{Atmoscol2023}},
+	title = {aladinor/{Atmoscol2023}: {Steable} version 0.1.0-{Beta}},
+	url = {https://zenodo.org/doi/10.5281/zenodo.8316796},
+	urldate = {2025-06-09},
+	year = {2023},
+	bdsk-url-1 = {https://zenodo.org/doi/10.5281/zenodo.8316796},
+	bdsk-url-2 = {https://doi.org/10.5281/ZENODO.8316796}}
+
+@misc{ladino_erad_2024,
+	author = {Ladino, Alfonso and del Moral M{\'e}ndez, Anna and Javornik, Brenda and Michelson, Daniel and Wolfensberger, Daniel and Ghiggi, Gionata and DeHart, Jen and Figueras i Ventura, Jordi and Giles, Julian and M{\"u}hlbauer, Kai and Grover, Maxwell and Dixon, Mike and Jackson, Robert and Collis, Scott and Cha, Ting-Yu and contributors, ERAD2024 Open Radar Science Shortcourse},
+	doi = {10.5281/zenodo.13694511},
+	month = sep,
+	publisher = {Zenodo},
+	title = {{ERAD} 2024 {Open} {Radar} {Science} {Shortcourse}},
+	url = {https://zenodo.org/records/13694511},
+	urldate = {2025-03-10},
+	year = {2024},
+	bdsk-url-1 = {https://zenodo.org/records/13694511},
+	bdsk-url-2 = {https://doi.org/10.5281/zenodo.13694511}}
+
+@inproceedings{pimentel_2019,
+	author = {Pimentel, Jo{\~a}o Felipe and Murta, Leonardo and Braganholo, Vanessa and Freire, Juliana},
+	booktitle = {2019 {IEEE}/{ACM} 16th {International} {Conference} on {Mining} {Software} {Repositories} ({MSR})},
+	doi = {10.1109/MSR.2019.00077},
+	file = {IEEE Xplore Abstract Record:/Users/brianrose/Zotero/storage/MDAB5D8U/8816763.html:text/html},
+	keywords = {Best practices, github, jupyter notebook, Media, Programming, Python, reproducibility, Testing, Tools},
+	month = may,
+	note = {ISSN: 2574-3864},
+	pages = {507--517},
+	title = {A {Large}-{Scale} {Study} {About} {Quality} and {Reproducibility} of {Jupyter} {Notebooks}},
+	url = {https://ieeexplore.ieee.org/document/8816763},
+	urldate = {2025-03-08},
+	year = {2019},
+	bdsk-url-1 = {https://ieeexplore.ieee.org/document/8816763},
+	bdsk-url-2 = {https://doi.org/10.1109/MSR.2019.00077}}
+
+@article{wilkinson_fair_2016,
+	author = {Wilkinson, Mark D. and Dumontier, Michel and Aalbersberg, IJsbrand Jan and Appleton, Gabrielle and Axton, Myles and Baak, Arie and Blomberg, Niklas and Boiten, Jan-Willem and da Silva Santos, Luiz Bonino and Bourne, Philip E. and Bouwman, Jildau and Brookes, Anthony J. and Clark, Tim and Crosas, Merc{\`e} and Dillo, Ingrid and Dumon, Olivier and Edmunds, Scott and Evelo, Chris T. and Finkers, Richard and Gonzalez-Beltran, Alejandra and Gray, Alasdair J. G. and Groth, Paul and Goble, Carole and Grethe, Jeffrey S. and Heringa, Jaap and 't Hoen, Peter A. C. and Hooft, Rob and Kuhn, Tobias and Kok, Ruben and Kok, Joost and Lusher, Scott J. and Martone, Maryann E. and Mons, Albert and Packer, Abel L. and Persson, Bengt and Rocca-Serra, Philippe and Roos, Marco and van Schaik, Rene and Sansone, Susanna-Assunta and Schultes, Erik and Sengstag, Thierry and Slater, Ted and Strawn, George and Swertz, Morris A. and Thompson, Mark and van der Lei, Johan and van Mulligen, Erik and Velterop, Jan and Waagmeester, Andra and Wittenburg, Peter and Wolstencroft, Katherine and Zhao, Jun and Mons, Barend},
+	copyright = {2016 The Author(s)},
+	doi = {10.1038/sdata.2016.18},
+	file = {Full Text PDF:/Users/brianrose/Zotero/storage/YX8Y3T6Q/Wilkinson et al. - 2016 - The FAIR Guiding Principles for scientific data management and stewardship.pdf:application/pdf},
+	issn = {2052-4463},
+	journal = {Scientific Data},
+	keywords = {Publication characteristics, Research data},
+	language = {en},
+	month = mar,
+	note = {Publisher: Nature Publishing Group},
+	number = {1},
+	pages = {160018},
+	title = {The {FAIR} {Guiding} {Principles} for scientific data management and stewardship},
+	url = {https://www.nature.com/articles/sdata201618},
+	urldate = {2025-02-06},
+	volume = {3},
+	year = {2016},
+	bdsk-url-1 = {https://www.nature.com/articles/sdata201618},
+	bdsk-url-2 = {https://doi.org/10.1038/sdata.2016.18}}
+
+@book{dask_2016,
+	author = {{Dask Development Team}},
+	title = {Dask: {Library} for dynamic task scheduling},
+	url = {https://dask.org},
+	year = {2016},
+	bdsk-url-1 = {http://dask.pydata.org}}
+
+@article{xarray_2017,
+	author = {Hoyer, Stephan and Hamman, Joe},
+	doi = {10.5334/jors.148},
+	issn = {2049-9647},
+	journal = {Journal of Open Research Software},
+	language = {en-US},
+	month = apr,
+	number = {1},
+	shorttitle = {xarray},
+	title = {xarray: {N}-{D} labeled {Arrays} and {Datasets} in {Python}},
+	url = {https://openresearchsoftware.metajnl.com/articles/10.5334/jors.148},
+	urldate = {2025-03-08},
+	volume = {5},
+	year = {2017},
+	bdsk-url-1 = {https://openresearchsoftware.metajnl.com/articles/10.5334/jors.148},
+	bdsk-url-2 = {https://doi.org/10.5334/jors.148}}
+
+@misc{cartopy_2024,
+	author = {Phil Elson and Elliott Sales de Andrade and Greg Lucas and Ryan May and Richard Hattersley and Ed Campbell and Ruth Comer and Andrew Dawson and Bill Little and Stephane Raynaud and scmc72 and Alan D. Snow and lgolston and Byron Blay and Peter Killick and lbdreyer and Patrick Peglar and Nat Wilson and Andrew and Jon Szymaniak and Adrien Berchet and Corinne Bosley and Luke Davis and Filipe and John Krasting and Matthew Bradbury and stephenworsley and Daniel Kirkham},
+	copyright = {Creative Commons Attribution 4.0 International},
+	doi = {10.5281/ZENODO.1182735},
+	month = oct,
+	publisher = {Zenodo},
+	shorttitle = {{SciTools}/cartopy},
+	title = {cartopy v0.24.1},
+	url = {https://zenodo.org/doi/10.5281/zenodo.1182735},
+	urldate = {2025-03-08},
+	year = {2024},
+	bdsk-url-1 = {https://zenodo.org/doi/10.5281/zenodo.1182735},
+	bdsk-url-2 = {https://doi.org/10.5281/ZENODO.1182735}}
+
+@misc{pandas,
+	annote = {Other
+If you use this software, please cite it as below.},
+	author = {{Pandas development team}},
+	copyright = {BSD 3-Clause "New" or "Revised" License},
+	doi = {10.5281/ZENODO.3509134},
+	keywords = {data science, python},
+	month = sep,
+	publisher = {Zenodo},
+	shorttitle = {pandas-dev/pandas},
+	title = {pandas-dev/pandas: {Pandas}},
+	url = {https://zenodo.org/doi/10.5281/zenodo.3509134},
+	urldate = {2025-03-08},
+	year = {2024},
+	bdsk-url-1 = {https://zenodo.org/doi/10.5281/zenodo.3509134},
+	bdsk-url-2 = {https://doi.org/10.5281/ZENODO.3509134}}
+
+@article{Harris_array_2020,
+	author = {Harris, Charles R. and Millman, K. Jarrod and van der Walt, St{\'e}fan J. and Gommers, Ralf and Virtanen, Pauli and Cournapeau, David and Wieser, Eric and Taylor, Julian and Berg, Sebastian and Smith, Nathaniel J. and Kern, Robert and Picus, Matti and Hoyer, Stephan and van Kerkwijk, Marten H. and Brett, Matthew and Haldane, Allan and del R{\'\i}o, Jaime Fern{\'a}ndez and Wiebe, Mark and Peterson, Pearu and G{\'e}rard-Marchant, Pierre and Sheppard, Kevin and Reddy, Tyler and Weckesser, Warren and Abbasi, Hameer and Gohlke, Christoph and Oliphant, Travis E.},
+	copyright = {2020 The Author(s)},
+	doi = {10.1038/s41586-020-2649-2},
+	issn = {1476-4687},
+	journal = {Nature},
+	keywords = {Computational neuroscience, Computational science, Computer science, Software, Solar physics},
+	language = {en},
+	month = sep,
+	note = {Publisher: Nature Publishing Group},
+	number = {7825},
+	pages = {357--362},
+	title = {Array programming with {NumPy}},
+	url = {https://www.nature.com/articles/s41586-020-2649-2},
+	urldate = {2025-03-08},
+	volume = {585},
+	year = {2020},
+	bdsk-url-1 = {https://www.nature.com/articles/s41586-020-2649-2},
+	bdsk-url-2 = {https://doi.org/10.1038/s41586-020-2649-2}}
+
+@article{Rose_GEO_OSE_2023,
+	author = {Rose, Brian E. J. and Clyne, John and May, Ryan and Munroe, James and Snyder, Amelia and Eroglu, Orhan and Tyle, Kevin},
+	doi = {10.5281/zenodo.8184298},
+	language = {eng},
+	month = jul,
+	note = {Publisher: Zenodo},
+	shorttitle = {Project Pythia GEO OSE proposal},
+	title = {Collaborative {Research}: {GEO} {OSE} {TRACK} 2: {Project} {Pythia} and {Pangeo}: {Building} an inclusive geoscience community through accessible, reusable, and reproducible workflows},
+	url = {https://zenodo.org/records/8184298},
+	urldate = {2025-02-06},
+	year = {2023},
+	bdsk-url-1 = {https://zenodo.org/records/8184298},
+	bdsk-url-2 = {https://doi.org/10.5281/zenodo.8184298}}
+
+@misc{Foundations,
+	author = {Rose, Brian E. J. and Kent, Julia and Tyle, Kevin and Clyne, John and Banihirwe, Anderson and Camron, Drew and May, Ryan and Grover, Maxwell and Ford, Robert R. and Paul, Kevin and Morley, James and Eroglu, Orhan and Kailyn, Lily and Zacharias, Anissa},
+	doi = {10.5281/zenodo.14759276},
+	file = {Snapshot:/Users/brianrose/Zotero/storage/EC446TLR/14759276.html:text/html},
+	month = jan,
+	publisher = {Zenodo},
+	title = {Pythia {Foundations}},
+	url = {https://zenodo.org/records/14759276},
+	urldate = {2025-02-06},
+	year = {2025},
+	bdsk-url-1 = {https://zenodo.org/records/14759276},
+	bdsk-url-2 = {https://doi.org/10.5281/zenodo.14759276}}
+
+@article{Abernathey_pangeo_2017,
+	author = {Abernathey, Ryan and Paul, Kevin and Hamman, Joe and Rocklin, Matthew and Lepore, Chiara and Tippett, Michael and Henderson, Naomi and Seager, Richard and May, Ryan and Del Vento, Davide},
+	doi = {10.6084/m9.figshare.5361094.v1},
+	language = {en},
+	month = aug,
+	title = {Pangeo {NSF} {Earthcube} {Proposal}},
+	url = {https://figshare.com/articles/journal_contribution/Pangeo_NSF_Earthcube_Proposal/5361094/1},
+	urldate = {2025-03-08},
+	year = {2017},
+	bdsk-url-1 = {https://figshare.com/articles/journal_contribution/Pangeo_NSF_Earthcube_Proposal/5361094/1},
+	bdsk-url-2 = {https://doi.org/10.6084/m9.figshare.5361094.v1}}