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  1. MAGpy MAGpy Public

    Forked from mw55309/MAGpy

    Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)

    Python 62 23

  2. KOunt KOunt Public

    Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.

    Python 24

  3. PULpy PULpy Public

    Open prediction of Polysaccharide Utilisation Loci (PUL)

    Python 22 9

  4. snakemake_pipelines snakemake_pipelines Public

    A repository for public Snakemake pipelines

    Python 8

  5. sm_assemblies sm_assemblies Public

    Analysis of protein coding exons in single molecule assemblies

    Perl 7 1

  6. MAGwash MAGwash Public

    Pipeline to clean MAGs

    Python 5 1

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