[tools] Replace 'annotation' references in tools with 'events'

[jeffersoncasimir]

Closes #9665

[skarya22]

@jeffersoncasimir I can't seem to get around this error for update_event_files, should I be able to run it?

PHP Warning:  fopen(/data-raisinbread/bids_imports/Face13_BIDSVersion_1.1.0/sub-OTT167/ses-V1/eeg/sub-OTT167_ses-V1_task-faceO_events.tsv): Failed to open stream: Read-only file system in /var/www/loris/modules/electrophysiology_browser/php/models/electrophysioevents.class.inc on line 410

Warning: fopen(/data-raisinbread/bids_imports/Face13_BIDSVersion_1.1.0/sub-OTT167/ses-V1/eeg/sub-OTT167_ses-V1_task-faceO_events.tsv): Failed to open stream: Read-only file system in /var/www/loris/modules/electrophysiology_browser/php/models/electrophysioevents.class.inc on line 410

[skarya22]

LGTM except that I can't test update_event_files -- once confirmation received on that I will approve

[jeffersoncasimir]

/data-raisinbread/ is read-only and probably defined as the dataDirBasepath in the Config table or the project/config.xml file. This should ideally be tested on a copy of the data in a writeable location.

[skarya22]

@jeffersoncasimir I set my configuration module to use /data/raisinbread-copy

But for some reason the script is still using the old value :(

[jeffersoncasimir]

If this is what is expected, I would make sure that it is not being overridden in project/config.xml:
SELECT Value FROM Config JOIN ConfigSettings ON ConfigID = ConfigSettings.ID WHERE Name = 'dataDirBasepath';

[skarya22]

LGTM