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docs: Update Documentation #211

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Updated documentation, checked all code snippets including examples.

Still to do:

Meganton added 26 commits April 26, 2025 20:23
- Renamed the function `run` to `evaluate_pipeline` for clarity.
- Updated references to the evaluation function in the documentation.
- Clarified the return structure of the evaluation function to include 'objective_to_minimize' instead of 'loss'.
- Changed the summary output structure in the documentation to reflect new file names.
- Added clarification on cost metrics in the evaluation process.
@Meganton Meganton changed the title Update Documentation docs: Update Documentation Apr 27, 2025
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