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Nightly benchmark consolidation Nightly benchmark consolidation #4: Scheduled
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feat: Claude prompt includes cross-platform comparison for grant just… CI #36: Commit 42c5bb3 pushed by bsphinney
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feat: export QC data for backup, migration, and AI-assisted analysis CI #35: Commit f3f59da pushed by bsphinney
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feat: raw file validation catches corrupt/incomplete files before search CI #34: Commit a7f72e1 pushed by bsphinney
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feat: DIA-NN version pinning and future-proof library versioning CI #33: Commit 0cff561 pushed by bsphinney
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docs: clarify DIA-NN licensing history — STAN is academic so it's free CI #32: Commit ced047b pushed by bsphinney
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docs: strengthen DIA-NN license language — clarify STAN does not bund… CI #31: Commit decff56 pushed by bsphinney
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feat: submission dedup + community baseline download CI #30: Commit b2bd2bd pushed by bsphinney
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feat: upload community libraries, outlier detection, benchmark report CI #29: Commit f65e329 pushed by bsphinney
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Nightly benchmark consolidation Nightly benchmark consolidation #3: Scheduled
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docs: add HPC guide with all gotchas for running DIA-NN/Sage on SLURM CI #28: Commit f5bc971 pushed by bsphinney
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docs: add Golden Rule to CLAUDE.md — document everything as you go CI #27: Commit 7f4aaf4 pushed by bsphinney
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docs: document the two DIA-NN containers on Hive (critical gotcha) CI #26: Commit 5ff4da4 pushed by bsphinney
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Nightly benchmark consolidation Nightly benchmark consolidation #2: Scheduled
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fix: community library format is .parquet not .predicted.speclib CI #25: Commit e947e99 pushed by bsphinney
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docs: update README + user guide IPS formula (was still showing old G… CI #24: Commit 7df3c8b pushed by bsphinney
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docs: CLAUDE.md rule — always keep HF Space + relay in sync with code… CI #23: Commit 8f5be19 pushed by bsphinney
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feat: replace GRS with IPS (Instrument Performance Score) CI #22: Commit b9d5988 pushed by bsphinney
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feat: hierarchical column-specific cohorts for community benchmark CI #21: Commit 40edc78 pushed by bsphinney
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docs: add citations for DIA-NN, Sage, and Matthews & Hayes 1976 CI #20: Commit 6fd063a pushed by bsphinney
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feat: points-across-peak metric for DIA and DDA CI #19: Commit aeefa2b pushed by bsphinney
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fix: restore config templates CI #18: Commit 580c2fa pushed by bsphinney
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feat: add points-across-peak metric to TODO, update memory CI #17: Commit c6cd18a pushed by bsphinney
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feat: baseline builder, LC column tracking, column catalog CI #16: Commit 1c6500e pushed by bsphinney
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Nightly benchmark consolidation Nightly benchmark consolidation #1: Scheduled
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