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21 Open 46 Closed
21 Open 46 Closed
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Issues list

project closure documentation documentation Improvements or additions to documentation
#128 opened Feb 28, 2025 by KaSiCbg
Change Nuc Reference to Fasta with header
#127 opened Feb 28, 2025 by gordonkoehn
1
@gordonkoehn
1
test: add orthogonal test with nextclade
#124 opened Feb 27, 2025 by gordonkoehn
@gordonkoehn
Explore Smart Sorting for Low Resource Conversion enhancement New feature or request
#119 opened Feb 26, 2025 by gordonkoehn
@gordonkoehn
bug: progress bar written in new line on EULER
#118 opened Feb 25, 2025 by gordonkoehn
remove primers.yaml from inputs and more to resources / reference from V-Pipe
#117 opened Feb 25, 2025 by gordonkoehn
test: validate single JSON from printed NDJSON
#116 opened Feb 25, 2025 by gordonkoehn
Add Snakemake formater and unittests
#115 opened Feb 25, 2025 by gordonkoehn
1
Add V-pipe workflow specific info on metadata to sr2silo
#113 opened Feb 25, 2025 by gordonkoehn
feature: Improve Performance of Read Processing And Translation enhancement New feature or request
#109 opened Feb 24, 2025 by gordonkoehn
@gordonkoehn
feature: implement snakemake workflow for processing a list of data
#107 opened Feb 24, 2025 by gordonkoehn
feature: pull and reformat reference from nextclade
#103 opened Feb 21, 2025 by gordonkoehn
@gordonkoehn
tests: add test coverage to actions
#94 opened Feb 18, 2025 by gordonkoehn
tests: add missing tests to sr2silo.process.convert
#93 opened Feb 18, 2025 by gordonkoehn
tests: add missing tests to sr2silo.process.interface objects test
#92 opened Feb 18, 2025 by gordonkoehn
@gordonkoehn
test: implement check if aligment of amino acid read is in the same region as on the DNA level test
#90 opened Feb 7, 2025 by gordonkoehn
Add Output verification to Start-to-End test test
#81 opened Jan 20, 2025 by gordonkoehn
@gordonkoehn
1
doc: start populating the docs documentation Improvements or additions to documentation
#77 opened Jan 10, 2025 by gordonkoehn
Add instructions to copy .env.example to .env ready to run documentation Improvements or additions to documentation enhancement New feature or request
#75 opened Jan 10, 2025 by gordonkoehn
@gordonkoehn
Read Pairing & Merge enhancement New feature or request question Further information is requested
#54 opened Dec 2, 2024 by gordonkoehn
1
@gordonkoehn
6
meta: sr2silo for Loculus Architecture epic Epic task / Overarching issue
#45 opened Nov 25, 2024 by gordonkoehn
4 tasks done
@gordonkoehn
4
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