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Releases: cmdoret/dnaglider

v0.0.5

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@cmdoret cmdoret released this 08 Nov 15:09
v0.0.3-16-g53f9762

bump to v0.0.5

v0.0.4

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@cmdoret cmdoret released this 09 Mar 14:29
  • Replace Euclidean distance by cosine distance for k-mer divergence
  • Fix bug k-mer in frequency counter

v0.0.3

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@cmdoret cmdoret released this 07 Oct 12:54
fix validation of input fields and add license

v0.0.2

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@cmdoret cmdoret released this 07 Oct 11:14
performance improvements and better error handling

v0.0.1: Allow overlapping windows

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@cmdoret cmdoret released this 06 Oct 17:25
  • Allow overlapping windows and add a CLI option to change the stride (distance between window starts).
  • Only complete windows are now computed (i.e. truncated windows towards the end of chromosomes are discarded)

v0.0.0: Initial version

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@cmdoret cmdoret released this 06 Oct 15:35

First working version of dnaglider. It supports sliding window calculation of GC content, AT skew, sequence entropy and k-mer (euclidean) distance from reference. For now, only non-overlapping windows are supported.