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PyOP2 compiler updates #104
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| name: Test | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| # Don't immediately kill all if one Python version fails | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11'] | |
| env: | |
| CC: mpicc | |
| PETSC_DIR: ${{ github.workspace }}/petsc | |
| PETSC_ARCH: default | |
| PETSC_CONFIGURE_OPTIONS: --with-debugging=1 --with-shared-libraries=1 --with-c2html=0 --with-fortran-bindings=0 | |
| RDMAV_FORK_SAFE: 1 | |
| timeout-minutes: 60 | |
| steps: | |
| - name: Install system dependencies | |
| shell: bash | |
| run: | | |
| sudo apt update | |
| sudo apt install build-essential mpich libmpich-dev \ | |
| libblas-dev liblapack-dev gfortran | |
| - name: Set correct Python version | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Clone PETSc | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: firedrakeproject/petsc | |
| path: ${{ env.PETSC_DIR }} | |
| - name: Build and install PETSc | |
| shell: bash | |
| working-directory: ${{ env.PETSC_DIR }} | |
| run: | | |
| ./configure ${PETSC_CONFIGURE_OPTIONS} | |
| make | |
| - name: Build and install petsc4py | |
| # Remove this step when Firedrake PETSc branch is updated to support | |
| # building petsc4py with Cython>=3.0 | |
| shell: bash | |
| working-directory: ${{ env.PETSC_DIR }}/src/binding/petsc4py | |
| run: | | |
| pip install --upgrade pip | |
| pip install --upgrade wheel cython numpy | |
| pip install --no-deps . | |
| - name: Checkout pyop3 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: pyop3 | |
| - name: Install pyop3 and testing dependencies | |
| shell: bash | |
| working-directory: pyop3 | |
| run: | | |
| pip install ".[test]" | |
| pip install pytest-cov pytest-timeout pytest-xdist | |
| - name: Run tests | |
| shell: bash | |
| working-directory: pyop3 | |
| run: | | |
| pytest \ | |
| --durations=200 \ | |
| --tb=native \ | |
| --cov pyop3 \ | |
| --timeout=480 \ | |
| --timeout-method=thread \ | |
| -o faulthandler_timeout=540 \ | |
| -n 12 --dist worksteal \ | |
| -v tests | |
| timeout-minutes: 10 |