Bump a few dependencies to newer versions (2024-07) (#119)

* build: Bump flask-mail, v0.9 => v0.10

* build: Bump ruff, v0.4 => v0.5

* build: Bump psycopg, v3.1 => v3.2

* build: Bump marshmallow, v3.19 => v3.20

* build: Bump python-dateutil, v2.8 => v2.9

pyproject.toml

@@ -26,20 +26,20 @@ dependencies = [
   "flask~=3.0",
   "flask-caching~=2.1.0",
   "flask-jwt-extended~=4.6.0",
-  "flask_mail>=0.9.1",           # TODO: this package is dead, we should replace it
+  "flask_mail~=0.10.0",
   "flask_migrate~=4.0.0",
-  "flask_sqlalchemy~=3.1.0",     # constrained by sqlalchemy
+  "flask_sqlalchemy~=3.1.0",
   "flask-restx~=1.3.0",
   "ftfy~=6.0",
   "gunicorn~=21.0",
   "jinja2~=3.0",
   "joblib~=1.4",
   "markupsafe~=2.0",
-  "marshmallow~=3.19.0",
+  "marshmallow~=3.20.0",
   "numpy~=1.20",
-  "psycopg[binary,pool]~=3.1.0",
+  "psycopg[binary,pool]~=3.2.0",
   "pymupdf~=1.24.0",
-  "python-dateutil~=2.8",
+  "python-dateutil~=2.9",
   "python-dotenv~=1.0.0",
   "redis~=5.0",
   "rispy~=0.9.0",
@@ -57,7 +57,7 @@ dev = [
   "pytest~=8.0",
   "pytest-postgresql~=6.0",
   "SQLAlchemy-Utils~=0.41.0",
-  "ruff~=0.4.0",
+  "ruff~=0.5.0",
 ]
 
 [tool.setuptools.packages.find]
@@ -77,9 +77,6 @@ addopts = "--verbose"
 testpaths = ["tests"]
 
 [tool.ruff]
-# ignore line-length violations, None comparisons, unused imports
-ignore = ["E501", "E711", "F401"]
-ignore-init-module-imports = true
 line-length = 88
 indent-width = 4
 target-version = "py310"
@@ -91,6 +88,10 @@ indent-style = "space"
 skip-magic-trailing-comma = false
 line-ending = "auto"
 
+[tool.ruff.lint]
+# ignore line-length violations, None comparisons, unused imports
+ignore = ["E501", "E711", "F401"]
+
 [tool.ruff.lint.isort]
 lines-after-imports = 2
 known-first-party = ["colandr"]

requirements/dev.txt

@@ -4,4 +4,4 @@ mypy~=1.0
 pytest~=8.0
 pytest-postgresql~=6.0
 SQLAlchemy-Utils~=0.41.0
-ruff~=0.4.0
+ruff~=0.5.0

requirements/prod.txt

@@ -9,7 +9,7 @@ dedupe~=3.0.1
 flask~=3.0.0
 flask-caching~=2.1.0
 flask-jwt-extended~=4.6.0
-flask_mail>=0.9.1
+flask_mail~=0.10.0
 flask_migrate~=4.0.0
 flask_sqlalchemy~=3.1.0
 flask-restx~=1.3.0
@@ -18,11 +18,11 @@ gunicorn~=21.0
 jinja2~=3.0
 joblib~=1.4
 markupsafe~=2.0
-marshmallow~=3.19.0
+marshmallow~=3.20.0
 numpy~=1.20
-psycopg[binary,pool]~=3.1.0
+psycopg[binary,pool]~=3.2.0
 pymupdf~=1.24.0
-python-dateutil~=2.8
+python-dateutil~=2.9
 python-dotenv~=1.0.0
 redis~=5.0
 rispy~=0.9.0