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feat: FilterBam optionally writes to a rejects file #1033

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@nh13 nh13 commented Feb 21, 2025

Fixes #971

@nh13 nh13 requested a review from tfenne as a code owner February 21, 2025 06:01
@nh13 nh13 deployed to github-actions February 21, 2025 06:05 — with GitHub Actions Active
@nh13 nh13 temporarily deployed to github-actions February 21, 2025 06:05 — with GitHub Actions Inactive
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codecov bot commented Feb 21, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 95.68%. Comparing base (f0fd24c) to head (fabe5c5).

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #1033   +/-   ##
=======================================
  Coverage   95.68%   95.68%           
=======================================
  Files         126      126           
  Lines        7410     7415    +5     
  Branches      500      487   -13     
=======================================
+ Hits         7090     7095    +5     
  Misses        320      320           
Flag Coverage Δ
unittests 95.68% <100.00%> (+<0.01%) ⬆️

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feature request: add option to FilterBam to write filtered reads to separate file
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