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SpGEMM bad_alloc Error#31

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Floruaaa666 wants to merge 7 commits intogunrock:mainfrom
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SpGEMM bad_alloc Error#31
Floruaaa666 wants to merge 7 commits intogunrock:mainfrom
Floruaaa666:main

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@Floruaaa666
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My SpGEMM approach uses the inner product (CSR*CSC = dense format) and I used a few input matrices from SS to test. For some of the input matrices, the program had an error saying:

terminate called after throwing an instance of 'thrust::system::detail::bad_alloc'
  what():  std::bad_alloc: cudaErrorMemoryAllocation: out of memory

The matrices with this error:

mac_econ_fwd500:
Dimensions: 207,500 x 207,500
Non-zeros: 1,273,389​1​.

pwtk:
Dimensions: 217,918 x 217,918
Non-zeros: 11,524,432​2​.

scircuit:
Dimensions: 170,998 x 170,998
Non-zeros: 958,936​3​.

shipsec1:
Dimensions: 140,874 x 140,874
Non-zeros: 3,568,176​4​.

Comment on lines +12 to +13
// Allocate memory for the host matrix data
h_C.m_data.resize(d_C.rows * d_C.cols);
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You can see it here, what is the size of d_C.rows * d_C.cols? I think this is $N^2$ problem, which can easily exceed the total device memory a GPU has available.

h_C.m_data.resize(d_C.rows * d_C.cols);

// Copy matrix data from device to host
cudaMemcpy(h_C.m_data.data(), d_C.m_data_ptr, sizeof(type_t) * d_C.rows * d_C.cols, cudaMemcpyDeviceToHost);
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Same issue as above.

Comment thread examples/spgemm/thread_mapped.cu Outdated
csc_t<index_t, offset_t, type_t> csc(mtx.load(parameters.filename));

// Output matrix.
matrix_t<type_t> C(csr.rows, csc.cols);
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Same issue as above.

@neoblizz
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@Floruaaa666 I see that this is a work in progress, let me know when you'd like me to review for merge after its been cleaned up.

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2 participants