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Add sequencing to community stacks (#2355)
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docs/using/selecting.md

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@@ -286,19 +286,20 @@ The core stacks are but a tiny sample of what's possible when combining Jupyter
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We encourage members of the Jupyter community to create their own stacks based on the core images and link them below.
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See the [contributing guide](../contributing/stacks.md) for information about how to create your own Jupyter Docker Stack.
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| Flavor | Binder | Description |
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| -------------- | ----------------------- | --------------------------------------------------------------------------------------------------------- |
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| [csharp] | [![bb]][csharp_b] | More than 200 Jupyter Notebooks with example **C#** code |
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| [education] | [![bb]][education_b] | **`nbgrader`** and `RISE` on top of the `datascience-notebook` image |
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| [ihaskell] | [![bb]][ihaskell_b] | Based on [**IHaskell**][ihaskell_project]. Includes popular packages and example notebooks |
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| [java] | [![bb]][java_b] | [**IJava**][ijava] kernel on top of the `minimal-notebook` image |
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| [sage] | [![bb]][sage_b] | [**sagemath**][sagemath] kernel on top of the `minimal-notebook` image |
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| [cgspatial] | [![bb]][cgspatial_b] | Major **geospatial** Python & R libraries on top of the `datascience-notebook` image |
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| [kotlin] | [![bb]][kotlin_b] | [**Kotlin** kernel for Jupyter/IPython][kotlin_kernel] on top of the `base-notebook` image |
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| [transformers] | [![bb]][transformers_b] | [**Transformers**][transformers_lib] and NLP libraries such as `Tensorflow`, `Keras`, `Jax` and `PyTorch` |
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| [scraper] | [![bb]][scraper_b] | **Scraper** tools (`selenium`, `chromedriver`, `beatifulsoup4`, `requests`) on `minimal-notebook` image |
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| [almond] | [![bb]][almond_b] | Scala kernel for Jupyter using **Almond** on top of the `base-notebook` image |
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| [lisp-stat] | [![bb]][lisp-stat_b] | Common Lisp statistical computing environment on top of the `minimal-notebook` image |
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| Flavor | Binder | Description |
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| -------------- | ----------------------- | --------------------------------------------------------------------------------------------------------------------------------------- |
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| [csharp] | [![bb]][csharp_b] | More than 200 Jupyter Notebooks with example **C#** code |
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| [education] | [![bb]][education_b] | **`nbgrader`** and `RISE` on top of the `datascience-notebook` image |
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| [ihaskell] | [![bb]][ihaskell_b] | Based on [**IHaskell**][ihaskell_project]. Includes popular packages and example notebooks |
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| [java] | [![bb]][java_b] | [**IJava**][ijava] kernel on top of the `minimal-notebook` image |
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| [sage] | [![bb]][sage_b] | [**sagemath**][sagemath] kernel on top of the `minimal-notebook` image |
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| [cgspatial] | [![bb]][cgspatial_b] | Major **geospatial** Python & R libraries on top of the `datascience-notebook` image |
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| [kotlin] | [![bb]][kotlin_b] | [**Kotlin** kernel for Jupyter/IPython][kotlin_kernel] on top of the `base-notebook` image |
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| [transformers] | [![bb]][transformers_b] | [**Transformers**][transformers_lib] and NLP libraries such as `Tensorflow`, `Keras`, `Jax` and `PyTorch` |
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| [scraper] | [![bb]][scraper_b] | **Scraper** tools (`selenium`, `chromedriver`, `beatifulsoup4`, `requests`) on `minimal-notebook` image |
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| [almond] | [![bb]][almond_b] | Scala kernel for Jupyter using **Almond** on top of the `base-notebook` image |
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| [lisp-stat] | [![bb]][lisp-stat_b] | Common Lisp statistical computing environment on top of the `minimal-notebook` image |
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| [sequencing] | [![bb]][sequencing_b] | Collection for bioinformatics sequencing data analysis, covering bulk RNA-seq, single-cell RNA-seq, spatial sequencing, and multi-omics |
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[bb]: https://static.mybinder.org/badge_logo.svg
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[csharp]: https://github.com/tlinnet/csharp-notebook
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[almond_b]: https://mybinder.org/v2/gh/almond-sh/examples/master?urlpath=lab%2Ftree%2Fnotebooks%2Findex.ipynb
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[lisp-stat]: https://lisp-stat.dev
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[lisp-stat_b]: https://mybinder.org/v2/gh/Lisp-Stat/IPS9/HEAD?urlpath=%2Fdoc%2Ftree%2Findex.ipynb
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[sequencing]: https://github.com/huchlab/sequencing-docker-stacks
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[sequencing_b]: https://mybinder.org/v2/gh/huchlab/sequencing-docker-stacks/main?urlpath=lab%2Ftree%2FREADME.ipynb
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### Other GPU-accelerated notebooks
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