Test scene from sample data #543
Open
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Description
What is this PR
Why is this PR needed?
This PR adds functionality to handle pose estimation data for individuals with heterogeneous keypoints—an essential capability for datasets involving different animal subjects with varying anatomy or tracking configurations. It also adds an example to demonstrate this functionality using a real-world SLEAP dataset.
What does this PR do?
Individual
andScene
classes to manage pose data with non-uniform keypoints.examples/test_scene_with_real_data.py
, which uses real sample data to demonstrate and test the implemented functionality.References
How has this PR been tested?
examples/
that loads sample SLEAP data (SLEAP_three-mice_Aeon_proofread.analysis.h5
), creates multipleIndividual
objects, and constructs aScene
to validate common keypoint handling.pre-commit
(ruff, mypy, codespell, check-manifest) and passes all checks.Is this a breaking change?
Does this PR require an update to the documentation?
Individual
andScene
classes, along with a usage example, should be added under the relevant module.Checklist:
examples/test_scene_with_real_data.py
)