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    26 repositories

    • motion-inr-miccai-2023

      Public
      Code for paper "Deep Learning for Automatic Strain Quantification in Arrhythmogenic Right Ventricular Cardiomyopathy"
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated May 19, 2026May 19, 2026

    • tagged-prior-inr

      Public
      Code for the MIDL 2026 paper - Tagged-Informed Prior for Motion Quantification in Cine CMR Using Implicit Neural Representations
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 15, 2026Apr 15, 2026

    • barretts_dysplasia_segmentation_processor

      Public
      Python
      •0•0•0•0•Updated Mar 26, 2026Mar 26, 2026

    • .github

      Public
      0•0•0•0•Updated Mar 11, 2026Mar 11, 2026

    • cardiac-neural-shapes

      Public
      Code for the SPIE Medical Imaging 2026 paper - Fighting MRI Anisotropy: Learning Multiple Cardiac Shapes From a Single Implicit Neural Representation.
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 11, 2026Feb 11, 2026

    • BE_p53_classification

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 5, 2026Feb 5, 2026

    • dual-phase-contrastive-learning

      Public
      Code accompanying the 2026 SPIE paper 'Dual-Phase Cross-Modal Contrastive Learning for CMR-Guided ECG Representations for Cardiovascular Disease Assessment'
      Python
      •0•0•0•0•Updated Feb 4, 2026Feb 4, 2026

    • WoF

      Public
      Python
      •
      GNU General Public License v3.0
      •2•1•0•0•Updated Apr 22, 2025Apr 22, 2025

    • bobnet

      Public
      PyTorch implementation of the Bounding Box Network (BoBNet) from the ConvNet-Based Localization of Anatomical Structures in 3D Medical Images paper.
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Mar 25, 2025Mar 25, 2025

    • barrett_gland_grading

      Public
      Jupyter Notebook
      •1•5•0•0•Updated Jan 24, 2025Jan 24, 2025

    • stochastic-coteaching

      Public
      Repository for paper on stochastic co-teaching
      Python
      •1•0•0•1•Updated Aug 8, 2024Aug 8, 2024

    • landmark_detection

      Public
      Code from TMI paper "Deep learning-based regression and classification for automatic landmark localization in medical images".
      Python
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Aug 8, 2024Aug 8, 2024

    • ubix-for-reliable-classification

      Public
      UBIX is a method to improve the generalizability of classification models, by introducing built-in robustness to dataset-specific (out-of-distribution) artifact…
      Python
      •
      MIT License
      •0•5•0•0•Updated Jun 28, 2024Jun 28, 2024

    • CNNTracker

      Public
      Code accompanying the paper 'Coronary Artery Centerline Extraction in Cardiac CT Angiography Using a CNN-Based Orientation Classifier' (Medical Image Analysis)
      Python
      •
      Other
      •4•0•0•0•Updated Jun 13, 2024Jun 13, 2024

    • FanCNN

      Public
      Code accompanying the paper 'Automatic Coronary Artery Plaque Quantification and CAD-RADS Prediction using Mesh Priors' (IEEE-TMI)
      Python
      •
      GNU General Public License v3.0
      •4•4•0•0•Updated Jan 30, 2024Jan 30, 2024

    • cycle_consistent_INR

      Public
      Code accompanying the 2023 paper 'Robust deformable image registration using cycle-consistent implicit representations' (IEEE Transactions on Medical Imaging)
      Python
      •2•0•0•0•Updated Oct 4, 2023Oct 4, 2023

    • temporally-consistent-echosegmentation

      Public
      This repository hosts the code of the paper "Temporally consistent segmentations from sparsely labeled echocardiograms using image registration for pseudo-label…
      Python
      •2•0•0•0•Updated Aug 11, 2023Aug 11, 2023

    • ContrastGAN

      Public
      Code for the MIDL 2023 paper: "Generative Adversarial Networks for Coronary CT Angiography Acquisition Protocol Correction with Explicit Attenuation Constraints…
      Python
      •
      MIT License
      •3•1•0•0•Updated Apr 28, 2023Apr 28, 2023

    • tangent_INR_registration_3D

      Public
      Code accompanying the 2023 MIDL paper 'Deformable Image Registration with Geometry-informed Implicit Neural Representations'
      Python
      •
      MIT License
      •2•0•0•0•Updated Apr 13, 2023Apr 13, 2023

    • calcium-scoring

      Public
      Python
      •
      GNU General Public License v3.0
      •4•20•0•0•Updated Dec 5, 2022Dec 5, 2022

    • SuperResolution_aniso_MRI

      Public
      Autoencoding of low-resolution MRI for Super-Resolution of anisotropic MRI
      Python
      •
      GNU General Public License v3.0
      •2•7•1•0•Updated Oct 7, 2022Oct 7, 2022

    • CACscoringUsingDomainAdaptation

      Public
      Python
      •1•5•0•0•Updated Aug 29, 2022Aug 29, 2022

    • ensemble-knowledge-distillation

      Public
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Apr 22, 2022Apr 22, 2022

    • cardiacSegmentationCCTA

      Public
      Code for training and inference of a 3D CNN for whole-heart segmentation in CCTA
      Python
      •
      GNU General Public License v3.0
      •2•14•0•0•Updated Mar 30, 2022Mar 30, 2022

    • airogs-example-algorithm

      Public
      Example code for making an inference algorithm for the AIROGS challenge
      Python
      •3•8•0•0•Updated Mar 1, 2022Mar 1, 2022

    • airogs-evaluation

      Public
      Python
      •0•4•0•0•Updated Jan 28, 2022Jan 28, 2022
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