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Lammps workflow#190

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prabhath-c wants to merge 32 commits into
mainfrom
lammps_workflow
Draft

Lammps workflow#190
prabhath-c wants to merge 32 commits into
mainfrom
lammps_workflow

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@prabhath-c

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@prabhath-c prabhath-c marked this pull request as draft June 17, 2026 19:33
lgasparic and others added 15 commits June 24, 2026 13:12
…_coeff for metal-metal, Ne-Ne, H-M and H-Ne interaction in WaterPotential node (values taken from IonPotential node). Added node for FixAtoms, where Atom species, z-coordiate or atom indexes can be defined.
* Edit gitignore, add pipeline and env for testing, add sample test

* Fix CI workflow paths and smoke-test checks

* Update CI pipeline to run tests and checks on all files

* Configure Ruff, Black, and Mypy without pyproject

* Format black

* Fix CI paths for branch checks and tests

* Match executorlib CI behavior

* Restore assyst import cleanup

* Format black

* Use DEPENDABOT_WORKFLOW_TOKEN instead of GITHUB_TOKEN

* Temporarily remove ruff

* Add back ruff check

* Update pipeline.yml

* Update pipeline.yml

Temporarily disable ruff, mypy and project install

* Set python version to 3.12 and update smoke test to use unittest

* Format black

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Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: pyiron-runner <pyiron@mpie.de>
Edit default password type hint
…mestep is not being recorded as the value from the dataclass, presently the CreateLammpsInput node seems to use the default timestep.
Comment thread atomistic/engine/lammps.py Outdated
Comment thread atomistic/engine/lammps.py Outdated
Sriram2631 and others added 7 commits July 1, 2026 10:31
Refactor RunLammpsCalculation to support threading and optional executor. Added input port for the executor and modified input port 'cores' to 'threads_per_core' in accordance with the keys in executorlib.
… static calculations. Merge multiple parsers into one
…files

- Add coverage configuration in .coveragerc
- Update pipeline.yml to include coverage reporting
- Create integration and unit test directories with initial test files for LAMMPS functionality
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5 participants