RNA in the GUI

[nbollis]

oh geez ... this is alot.

RNA Features

• Calibrate
• GPTMD
• Search
• Custom Modifications

Other Changes

• Gui Global Params is now a singleton
  • Loaded from disk on the launch of MM
  • Serialized to disk on close
  • This is how we switch between protein and RNA mode for GUI display.

[Copilot]

Pull Request Overview

Copilot reviewed 49 out of 51 changed files in this pull request and generated 5 comments.

Comments suppressed due to low confidence (2)

MetaMorpheus/GUI/TaskWindows/SearchTaskWindow.xaml.cs:1

• Incomplete comment ending with 'S' - appears to be accidentally truncated.

using EngineLayer;

MetaMorpheus/EngineLayer/GlobalVariables.cs:1

• Complex string manipulation for capitalization could be simplified using a more readable approach, such as a helper method or string formatting.

using Chemistry;

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[Copilot]

Pull Request Overview

Copilot reviewed 51 out of 53 changed files in this pull request and generated 7 comments.

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