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RocksDB inverted index support for fastgather

Status: Open.

#770 In sourmash-bio/sourmash_plugin_branchwater;

· JiaweiShen1116 opened on May 1, 2026

Crash when using manysearch with around 4M signatures

Status: Open.

#753 In sourmash-bio/sourmash_plugin_branchwater;

· jdwinkler opened on Feb 28, 2026

not having all comparisons

Status: Open.

#750 In sourmash-bio/sourmash_plugin_branchwater;

· Valentin-Bio opened on Feb 17, 2026

question about distance metric

Status: Open.

#749 In sourmash-bio/sourmash_plugin_branchwater;

· Valentin-Bio opened on Feb 17, 2026

Add the ability to merge two branchwater indexes, and the ability to add new signatures to an existing index

Status: Open.

#743 In sourmash-bio/sourmash_plugin_branchwater;

· matthuska opened on Feb 4, 2026

Updating indexes to resolve 'Column family not found: storage' rocksdb error is slow

Status: Open.

#742 In sourmash-bio/sourmash_plugin_branchwater;

· matthuska opened on Feb 4, 2026

document where manysearch gets its abundances from

Status: Open.

#740 In sourmash-bio/sourmash_plugin_branchwater;

· ctb opened on Jan 31, 2026

manysearch should support more & more flexible abundance metrics

Status: Open.

#739 In sourmash-bio/sourmash_plugin_branchwater;

· ctb opened on Jan 31, 2026

manysearch missing abundance metrics like f_uniq_weighted

Status: Open.

#738 In sourmash-bio/sourmash_plugin_branchwater;

· ccbaumler opened on Jan 30, 2026

pairwise failing on ~77k SARS-CoV-2 genomes

Status: Open.

#737 In sourmash-bio/sourmash_plugin_branchwater;

· JaspervB-tud opened on Jan 27, 2026

manysketch can produce borked manifest rows

Status: Open.

#732 In sourmash-bio/sourmash_plugin_branchwater;

· ctb opened on Jan 8, 2026

adjust manysearch output columns to be in bp, not hashes

Status: Open.

#729 In sourmash-bio/sourmash_plugin_branchwater;

· ctb opened on Dec 26, 2025