fixed invaled dependencies

fixed invalid pyproject configuration
added missing __init__.py files
updated readme

Pipfile

@@ -16,13 +16,13 @@ autoflake = "*"
 twine = "*"
 
 [packages]
-scipy = "*"
-numpy = "*"
-tqdm = "*"
+scipy = ">=1.8.0"
+numpy = ">=1.18.5"
+tqdm = ">=4.63.0"
 TextGrid = ">=1.5"
-pandas = "*"
+pandas = ">=1.4.0"
 ordered-set = ">=4.1.0"
-matplotlib = "*"
+matplotlib = ">=3.5.0"
 pronunciation-dictionary = ">=0.0.4"
 
 [requires]

README.md

@@ -9,39 +9,38 @@ CLI to modify TextGrids and their corresponding audio files.
 ## Features
 
 - grids
-  - merge grids together
-  - export vocabulary out of multiple grid files
-  - plot durations
-  - exports marks of a tier to a file
+  - `merge`: merge grids together
+  - `export-vocabulary`: export vocabulary out of multiple grid files
+  - `plot-durations`: plot durations
+  - `export-marks`: exports marks of a tier to a file
 - grid
-  - convert text files to grid files
-  - synchronize grid minTime and maxTime according to the corresponding audio file
-  - split a grid file on intervals into multiple grid files (incl. audio files)
-  - print statistics
+  - `create`: convert text files to grid files
+  - `sync`: synchronize grid minTime and maxTime according to the corresponding audio file
+  - `split`: split a grid file on intervals into multiple grid files (incl. audio files)
+  - `print-stats`: print statistics
 - tiers
-  - apply mapping table to marks
-  - transcribe words of tiers using a pronunciation dictionary
-  - remove tiers
-  - remove symbols from tiers
-  - mark silence intervals
+  - `apply-mapping`: apply mapping table to marks
+  - `transcribe`: transcribe words of tiers using a pronunciation dictionary
+  - `remove`: remove tiers
+  - `remove-symbols`: remove symbols from tiers
+  - `mark-silence`: mark silence intervals
 - tier
-  - rename tier
-  - clone tier
-  - copy tier from one grid to another
-  - map tier to other tiers
-  - move tier to another position
-  - export content of tier to a txt file
-  - import content of tier from a txt file
+  - `rename`: rename tier
+  - `clone`: clone tier
+  - `map`: map tier to other tiers
+  - `move`: move tier to another position
+  - `export`: export content of tier to a txt file
+  - `import`: import content of tier from a txt file
 - intervals
-  - join intervals between pauses
-  - join intervals by boundaries of a tier
-  - join intervals by a duration
-  - join intervals containing specific marks
-  - join intervals containing specific symbols
-  - align boundaries of tiers according to a reference tier
-  - split intervals
-  - remove intervals
-  - plot durations
+  - `join-between-pauses`: join intervals between pauses
+  - `join-by-boundary`: join intervals by boundaries of a tier
+  - `join-by-duration`: join intervals by a duration
+  - `join-marks`: join intervals containing specific marks
+  - `join-symbols`: join intervals containing specific symbols
+  - `fix-boundaries`: align boundaries of tiers according to a reference tier
+  - `split`: split intervals
+  - `remove`: remove intervals
+  - `plot-durations`: plot durations
 
 ## Roadmap
 
@@ -62,14 +61,14 @@ textgrid-tools-cli
 
 ## Dependencies
 
-- scipy
-- numpy
-- tqdm
-- TextGrid >= 1.5
-- pandas
-- matplotlib
-- ordered-set >=4.1.0
-- pronunciation-dictionary >=0.0.4
+- numpy>=1.18.5
+- scipy>=1.8.0
+- tqdm>=4.63.0
+- TextGrid>=1.5
+- pandas>=1.4.0
+- ordered_set>=4.1.0
+- matplotlib>=3.5.0
+- pronunciation_dictionary>=0.0.4
 
 ## Troubleshooting
 
@@ -81,6 +80,14 @@ sudo apt-get install ffmpeg -y
 ffmpeg -i *.mp3 -acodec pcm_s16le -ar 22050 *.wav
 ```
 
+## License
+
+MIT License
+
+## Acknowledgments
+
+Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project-ID 416228727 – CRC 1410
+
 ## Citation
 
 If you want to cite this repo, you can use this BibTeX-entry:

pyproject.toml

@@ -3,7 +3,7 @@ name = "textgrid-tools"
 version = "0.0.3"
 description = "CLI to modify TextGrids and their corresponding audio files."
 readme = "README.md"
-requires-python = ">=3.6"
+requires-python = ">=3.8"
 license = {text = "MIT"}
 authors = [
   {name = "Stefan Taubert", email = "[email protected]"}
@@ -31,21 +31,19 @@ classifiers = [
   "Operating System :: Microsoft :: Windows",
   "Programming Language :: Python",
   "Programming Language :: Python :: 3",
-  "Programming Language :: Python :: 3.6",
-  "Programming Language :: Python :: 3.7",
   "Programming Language :: Python :: 3.8",
   "Programming Language :: Python :: 3.9",
   "Programming Language :: Python :: 3.10",
   "License :: OSI Approved :: MIT License",
 ]
 dependencies = [
-  "scipy",
-  "numpy",
-  "tqdm",
+  "numpy>=1.18.5",
+  "scipy>=1.8.0",
+  "tqdm>=4.63.0",
   "TextGrid>=1.5",
-  "pandas",
+  "pandas>=1.4.0",
   "ordered_set>=4.1.0",
-  "matplotlib",
+  "matplotlib>=3.5.0",
   "pronunciation_dictionary>=0.0.4",
 ]
 
@@ -63,12 +61,14 @@ include = [
   "textgrid_tools.*",
   "textgrid_tools_cli",
   "textgrid_tools_cli.*",
+  "textgrid_tools_tests",
+  "textgrid_tools_tests.*",
+  "textgrid_tools_cli_tests",
+  "textgrid_tools_cli_tests.*",
 ]
 exclude = [
-  "textgrid_tools_tests",
   "textgrid_tools_debug",
   "textgrid_tools_cli_debug",
-  "textgrid_tools_cli_tests",
   "textgrid_tools_old"
 ]
 namespaces = true
@@ -104,6 +104,21 @@ known_third_party = [
   "pronunciation_dictionary"
 ]
 
+[tool.tox]
+legacy_tox_ini = """
+[tox]
+envlist = py{38,39,310}
+isolated_build = True
+
+[testenv]
+deps = 
+  pytest
+commands = 
+  pytest
+  textgrid-tools-cli
+"""
+
+
 [build-system]
 requires = [
   "setuptools >= 40.9.0",

src/textgrid_tools_cli/cli.py

@@ -91,7 +91,7 @@ def print_features():
   for parser_name, (methods, help_str) in parsers.items():
     print(f"- {parser_name}")
     for command, description, method in methods:
-      print(f"  - {description}")
+      print(f"  - `{command}`: {description}")
 
 
 def _init_parser():

src/textgrid_tools_cli_tests/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_between_pause_joining/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_common/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_duration_joining/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_removing/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_sentence_joining/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/py_splitting/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/test_splitting_v2_py/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/intervals/test_symbols_joining_py/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/py_helper/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/tier/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/tier/py_moving/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/tiers/__init__.py

@@ -0,0 +1 @@
+#

src/textgrid_tools_tests/tiers/py_symbol_removing/__init__.py

@@ -0,0 +1 @@
+#