Skip to content

Pull requests: tskit-dev/tskit

New pull request New
14 Open 1,738 Closed
14 Open 1,738 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Fix genetic_relatedness to allow single sample set with self-comparisons
#3235 opened Jun 26, 2025 by andrewkern Loading…
2 tasks done
1
2
Initial numba module
#3225 opened Jun 18, 2025 by benjeffery • Draft
11
Check mutation parents on tree sequence init
#3212 opened Jun 10, 2025 by benjeffery Loading…
36
Prevent iterating over a TopologyCounter
#3202 opened Jun 9, 2025 by benjeffery Loading…
1
6
Draft governance model
#3188 opened Jun 5, 2025 by benjeffery • Draft
23
Create a new merge() function, and use that for concatenate
#3183 opened May 29, 2025 by hyanwong • Draft
3 tasks done
1
25
Clarify mutation order in Site() object
#3067 opened Dec 5, 2024 by hyanwong Loading…
5
Unifying stat method desc and linking to math summary
#3005 opened Sep 28, 2024 by gregorgorjanc Loading… Python 0.6.5
5
time windows in statistics
#2948 opened May 9, 2024 by petrelharp • Draft Python 0.6.5
72
Implement efficient seeking from non-null trees using tree_pos
#2911 opened Feb 26, 2024 by duncanMR • Draft
3 tasks
Python 0.6.5
5
Support all-nodes matching in LSHMM
#2861 opened Oct 12, 2023 by jeromekelleher • Draft
1
Add tests for genotype imputation
#2815 opened Aug 7, 2023 by szhan Loading…
3 of 6 tasks
Python 0.6.5
1
@szhan
28
Add docs discussing how to get a matrix of pairwise comparisons
#2776 opened Jul 5, 2023 by hyanwong Loading… Python 0.6.5
4
Generic iterator class for trees and variants
#2762 opened Jun 13, 2023 by hyanwong • Draft
2 of 3 tasks
Python 0.6.5
1
1
ProTip! What’s not been updated in a month: updated:<2025-05-30.