docs: sync service docs with registry#99
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Align README, web docs, and agent skills with the current service registry so shipped services, ports, and Clerk coverage are documented consistently.
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Remove endpoint claims that do not match the implemented Clerk routes and clarify Resend domain verification support.
Sync web docs with the current service registry and Clerk session API so examples match implemented behavior.
Require explicit approval for curl usage from service skills and keep new single-service examples aligned with their default port.
Clarify MongoDB Atlas Data API methods and keep agent skills aligned with npx emulate usage.
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