Update nwb-schema submodule to NWB 2.10.0#2199
Merged
Merged
Conversation
Point the nwb-schema submodule to the tip of the prepare_2.10.0 branch, which advances the nested hdmf-common-schema to 1.9.0. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
10 tasks
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## dev #2199 +/- ##
=======================================
Coverage 95.29% 95.29%
=======================================
Files 30 30
Lines 3038 3038
Branches 450 450
=======================================
Hits 2895 2895
Misses 87 87
Partials 56 56
Flags with carried forward coverage won't be shown. Click here to find out more. ☔ View full report in Codecov by Harness. 🚀 New features to boost your workflow:
|
- Ignore the unresolvable ``pandas.core.frame.DataFrame`` autodoc cross-reference emitted for the ``-> pd.DataFrame`` return annotations on the new NWBFile events helpers (pandas only publishes ``pandas.DataFrame`` in its intersphinx inventory). - Reference the inherited ``write`` method via ``hdmf.backends.hdf5.h5tools.HDF5IO`` instead of ``pynwb.NWBHDF5IO``, which does not re-document it. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Pin the submodule to the released 2.10.0 tag (eed08cf), advancing the nwb_version/namespace version strings from 2.10.0-alpha to 2.10.0. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
sphinx-gallery writes docs/source/sg_execution_times.rst on every build. Gitignore it so it stays out of git status, and remove it in the docs Makefile clean target alongside the other gallery artifacts. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
oruebel
approved these changes
Jun 23, 2026
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Motivation
Updates the
nwb-schemasubmodule to the tip of theprepare_2.10.0branch (NWB 2.10.0), which depends on nwb-schema PR NeurodataWithoutBorders/nwb-schema#681. This advances the nestedhdmf-common-schemato 1.9.0 (addsMeaningsTable, promotesHERDto stable in hdmf-common).Draft while NWB 2.10.0 is finalized.
Also fixes some Sphinx warnings.
How to test the behavior?
The full pynwb test suite passes against the updated schema (
829 passed, 7 skipped, 6701 subtests passed), after clearing the cached core typemap (pynwb.clear_cache_dir()).Checklist
rufffrom the source directory.🤖 Generated with Claude Code