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1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -26,6 +26,7 @@ manifest.json

# Auto-generated tutorials
docs/source/tutorials/
docs/source/sg_execution_times.rst

### Python ###
# Byte-compiled / optimized / DLL files
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2 changes: 1 addition & 1 deletion docs/Makefile
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Expand Up @@ -46,7 +46,7 @@ help:
@echo " apidoc to build RST from source code"

clean:
-rm -rf $(BUILDDIR)/* $(RSTDIR)/$(PKGNAME)*.rst $(RSTDIR)/tutorials $(GALLERYDIR)/advanced_io/*.npy $(GALLERYDIR)/advanced_io/*.nwb
-rm -rf $(BUILDDIR)/* $(RSTDIR)/$(PKGNAME)*.rst $(RSTDIR)/tutorials $(RSTDIR)/sg_execution_times.rst $(GALLERYDIR)/advanced_io/*.npy $(GALLERYDIR)/advanced_io/*.nwb

html:
$(SPHINXBUILD) -b html $(ALLSPHINXOPTS) $(BUILDDIR)/html
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2 changes: 1 addition & 1 deletion docs/gallery/general/add_remove_containers.py
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Expand Up @@ -224,7 +224,7 @@
# model. The example builds a valid name by replacing ``/`` and ``:`` with ``_``.
#
# The legacy file stores ``model`` as a string attribute, so it cannot be modified in place
# (``mode="r+"``) or written to a new path with :py:meth:`~pynwb.NWBHDF5IO.write`. Use
# (``mode="r+"``) or written to a new path with :py:meth:`~hdmf.backends.hdf5.h5tools.HDF5IO.write`. Use
# :py:meth:`~pynwb.NWBHDF5IO.export` instead, and call
# :py:meth:`~hdmf.container.AbstractContainer.set_modified` on the :py:class:`~pynwb.device.Device` so
# that export rewrites it, dropping the legacy string attribute and writing a link to the new
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6 changes: 5 additions & 1 deletion docs/source/conf.py
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Expand Up @@ -168,7 +168,11 @@ def __call__(self, filename):

nitpicky = True
nitpick_ignore = [('py:class', 'Intracomm'),
('py:class', 'BaseStorageSpec')]
('py:class', 'BaseStorageSpec'),
# pandas publishes ``pandas.DataFrame`` but autodoc renders the return
# annotation as its qualname ``pandas.core.frame.DataFrame``, which has no
# intersphinx target.
('py:class', 'pandas.core.frame.DataFrame')]

linkcheck_ignore = [
r'https://training.incf.org/*', # temporary ignore until SSL certificate issue is resolved
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